RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 HSPE1P61604 102 aaKnown RBP8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 OXA1LQ15070 435 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 C2orf68Q2NKX9 166 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 C19orf35Q6ZS72 473 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 ZNF429Q86V71 674 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 C12orf45Q8N5I9 185 aaPredicted RBP8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 UXS1Q8NBZ7 420 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 SPIN2AQ99865 258 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 SPIN2BQ9BPZ2 258 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 HINT2Q9BX68 163 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 GON7Q9BXV9 100 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 KLK15Q9H2R5 256 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 FKBP11Q9NYL4 201 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 TMED3Q9Y3Q3 217 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 A0A1B0GU03 582 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 IGLC7A0M8Q6 106 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 CCSO14618 274 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 PRAF2O60831 178 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 PITX3O75364 302 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 FBXO24O75426 580 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 IGLV1-40P01703 118 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 PRH1P02810 166 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 SULT1A3P0DMM9 295 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 SULT1A4P0DMN0 295 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 PSMB8P28062 276 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 SLC35B1P78383 322 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 PRCDQ00LT1 54 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 WT1-ASQ06250 92 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 SMCO1Q147U7 214 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 AARDQ4LEZ3 155 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 TEX38Q6PEX7 206 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 TTC9CQ8N5M4 171 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 C3orf56Q8N813 242 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 OR5B3Q8NH48 314 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 FAM110DQ8TAY7 271 aaPredicted RBP8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 OR10C1Q96KK4 312 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 TMEM68Q96MH6 324 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 MS4A10Q96PG2 267 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 CITED1Q99966 193 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 CITED2Q99967 270 aaPredicted RBP8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 ZNF747Q9BV97 191 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 GPN1Q9HCN4 374 aaPredicted RBP8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 ZNF257Q9Y2Q1 563 aa8.36□□□□□ -1.07
SMARCA4-213ENST00000587988 PIGBOS1A0A0B4J2F0 54 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 SNRPGP15A8MWD9 76 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 IFNA17P01571 189 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 RPLP1P05386 114 aaKnown RBP8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 OR13C7P0DN81 318 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 PF4V1P10720 104 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 SLC25A6P12236 298 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 CTRB1P17538 263 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 PSMB6P28072 239 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 CD83Q01151 205 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 DEFA5Q01523 94 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 FOXE3Q13461 319 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 KIAA0141Q14154 515 aaPredicted RBP8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 TATDN3Q17R31 274 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 CTRB2Q6GPI1 263 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 C11orf87Q6NUJ2 197 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 C18orf65Q6ZTR6 163 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 RNF152Q8N8N0 203 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 OR4X2Q8NGF9 303 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 OR5M8Q8NGP6 311 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 ZNF355PQ9NSJ1 428 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 COA4Q9NYJ1 87 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 ALG5Q9Y673 324 aa8.35□□□□□ -1.07
SMARCA4-213ENST00000587988 C7orf66A4D0T2 115 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 NPIPB5A8MRT5 1133 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 IFNA21P01568 189 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 CRYGCP07315 174 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 ELANEP08246 267 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 RAB9AP51151 201 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 SPCS3P61009 180 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 CXorf66Q5JRM2 361 aaPredicted RBP8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 COMMD1Q8N668 190 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 OR52E5Q8NH55 327 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 OR1S1Q8NH92 325 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 SRSF8Q9BRL6 282 aaKnown RBP8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 PDCD10Q9BUL8 212 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 HSPB7Q9UBY9 170 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 DMRT1Q9Y5R6 373 aa8.34□□□□□ -1.07
SMARCA4-213ENST00000587988 C13orf42A0A1B0GVH6 325 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 A0A1W2PRX2 142 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 TCRBV4S1A1TA0A5B7 111 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 ADARB2-AS1A8MUL3 147 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 FAM25EA8MYX2 175 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 HOXA1P49639 335 aaPredicted RBP8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 MFAP2P55001 183 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 TNFRSF9Q07011 255 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 IAH1Q2TAA2 248 aaPredicted RBP8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 PDLIM3Q53GG5 364 aaPredicted RBP8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 THOC7Q6I9Y2 204 aaKnown RBP8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 OR2C3Q8N628 320 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 ZNF491Q8N8L2 437 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 OR4D5Q8NGN0 318 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 MYOZ3Q8TDC0 251 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 FANCD2OSQ96PS1 177 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 RBKSQ9H477 322 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 PLEKHA3Q9HB20 300 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms