RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 NXPH3O95157 252 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 TMEM50AO95807 157 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 IFNA17P01571 189 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 P2RY1P47900 373 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 SSBP2P81877 361 aaPredicted RBP11.84□□□□□ -0.51
NFIX-208ENST00000587260 PRCDQ00LT1 54 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 C16orf82Q7Z2V1 217 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 CIB3Q96Q77 187 aaPredicted RBP11.84□□□□□ -0.51
NFIX-208ENST00000587260 RASL11BQ9BPW5 248 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 NIPBLQ6KC79 2804 aaeCLIP11.83□□□□□ -0.52
NFIX-208ENST00000587260 FXYD6-FXYD2A0A087WZ82 144 aa11.83□□□□□ -0.52
NFIX-208ENST00000587260 FCN1O00602 326 aa11.83□□□□□ -0.52
NFIX-208ENST00000587260 SSSCA1O60232 199 aa11.83□□□□□ -0.52
NFIX-208ENST00000587260 VDAC2P45880 294 aaPredicted RBP11.83□□□□□ -0.52
NFIX-208ENST00000587260 COMPP49747 757 aaPredicted RBP11.83□□□□□ -0.52
NFIX-208ENST00000587260 EIF2B2P49770 351 aaKnown RBP11.83□□□□□ -0.52
NFIX-208ENST00000587260 GNB1P62873 340 aa11.83□□□□□ -0.52
NFIX-208ENST00000587260 UBA52P62987 128 aaKnown RBP11.83□□□□□ -0.52
NFIX-208ENST00000587260 ZNF562Q6V9R5 426 aa11.83□□□□□ -0.52
NFIX-208ENST00000587260 DTD1Q8TEA8 209 aa11.83□□□□□ -0.52
NFIX-208ENST00000587260 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
NFIX-208ENST00000587260 TSC22D2O75157 780 aa11.82□□□□□ -0.52
NFIX-208ENST00000587260 CA2P00918 260 aa11.82□□□□□ -0.52
NFIX-208ENST00000587260 HLA-DRB1P01911 266 aa11.82□□□□□ -0.52
NFIX-208ENST00000587260 AMY1AP04745 511 aa11.82□□□□□ -0.52
NFIX-208ENST00000587260 MYOD1P15172 320 aa11.82□□□□□ -0.52
NFIX-208ENST00000587260 C9orf152Q5JTZ5 239 aa11.82□□□□□ -0.52
NFIX-208ENST00000587260 DCUN1D4Q92564 292 aa11.82□□□□□ -0.52
NFIX-208ENST00000587260 TAF15Q92804 592 aaKnown RBP eCLIP11.82□□□□□ -0.52
NFIX-208ENST00000587260 AQP10Q96PS8 301 aa11.82□□□□□ -0.52
NFIX-208ENST00000587260 LYRM2Q9NU23 88 aaPredicted RBP11.82□□□□□ -0.52
NFIX-208ENST00000587260 TNCP24821 2201 aa11.82□□□□□ -0.52
NFIX-208ENST00000587260 CGB1A6NKQ9 187 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 CEBPZOSA8MTT3 80 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 E7EUB6 86 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 CLDN34H7C241 214 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 L7N2F9 121 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 M0QZK8 103 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 ARPC5O15511 151 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 ACTL6BO94805 426 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 RNASE1P07998 156 aaKnown RBP11.81□□□□□ -0.52
NFIX-208ENST00000587260 RPL23AP62750 156 aaKnown RBP11.81□□□□□ -0.52
NFIX-208ENST00000587260 BLCAPP62952 87 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 VAMP2P63027 116 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 ZNF345Q14585 488 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 TNXAQ16473 311 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 LAMTOR1Q6IAA8 161 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 ACOT7LQ6ZUV0 252 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 OR2C3Q8N628 320 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 GRPEL2Q8TAA5 225 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 HSPB9Q9BQS6 159 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 SRSF8Q9BRL6 282 aaKnown RBP11.81□□□□□ -0.52
NFIX-208ENST00000587260 TET2Q6N021 2002 aaPredicted RBP11.81□□□□□ -0.52
NFIX-208ENST00000587260 A0A1B0GW64 132 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 A0A1W2PN81 502 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 RNF222A6NCQ9 220 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 FAM181BA6NEQ2 426 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 OPN1MWP04001 364 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 OPN1MW2P0DN77 364 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 OPN1MW3P0DN78 364 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 HKR1P10072 659 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 CHRNA7P36544 502 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 RPL27AP46776 148 aaKnown RBP11.81□□□□□ -0.52
NFIX-208ENST00000587260 NKX2-5P52952 324 aaPredicted RBP11.81□□□□□ -0.52
NFIX-208ENST00000587260 ATP5IP56385 69 aaPredicted RBP11.81□□□□□ -0.52
NFIX-208ENST00000587260 OR2F1Q13607 317 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 LGALSLQ3ZCW2 172 aaPredicted RBP11.81□□□□□ -0.52
NFIX-208ENST00000587260 C10orf55Q5SWW7 151 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 C9orf62Q8N4C0 152 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 INO80EQ8NBZ0 244 aaPredicted RBP11.81□□□□□ -0.52
NFIX-208ENST00000587260 MFFQ9GZY8 342 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 HIPK2Q9H2X6 1198 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 PLEKHA3Q9HB20 300 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 PSENENQ9NZ42 101 aa11.81□□□□□ -0.52
NFIX-208ENST00000587260 IAPPP10997 89 aa11.8□□□□□ -0.52
NFIX-208ENST00000587260 CXCL2P19875 107 aa11.8□□□□□ -0.52
NFIX-208ENST00000587260 RPL12P30050 165 aaKnown RBP11.8□□□□□ -0.52
NFIX-208ENST00000587260 NUP62P37198 522 aaPredicted RBP11.8□□□□□ -0.52
NFIX-208ENST00000587260 CX3CL1P78423 397 aa11.8□□□□□ -0.52
NFIX-208ENST00000587260 SPINK9Q5DT21 86 aa11.8□□□□□ -0.52
NFIX-208ENST00000587260 Q6ZS46 218 aa11.8□□□□□ -0.52
NFIX-208ENST00000587260 HSD17B13Q7Z5P4 300 aaPredicted RBP11.8□□□□□ -0.52
NFIX-208ENST00000587260 TMEM252Q8N6L7 170 aa11.8□□□□□ -0.52
NFIX-208ENST00000587260 SRSF12Q8WXF0 261 aaKnown RBP11.8□□□□□ -0.52
NFIX-208ENST00000587260 NPFFR1Q9GZQ6 430 aa11.8□□□□□ -0.52
NFIX-208ENST00000587260 U3KQ87 197 aa11.8□□□□□ -0.52
NFIX-208ENST00000587260 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 A0A0D9SG52 128 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 MSGN1A6NI15 193 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 TRIM77I1YAP6 450 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 PLXNB1O43157 2135 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 HOXA1P49639 335 aaPredicted RBP11.79□□□□□ -0.52
NFIX-208ENST00000587260 RPP30P78346 268 aaKnown RBP11.79□□□□□ -0.52
NFIX-208ENST00000587260 NDPQ00604 133 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 FXYD3Q14802 87 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 BSXQ3C1V8 233 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 MRPL41Q8IXM3 137 aaKnown RBP11.79□□□□□ -0.52
NFIX-208ENST00000587260 KCNRGQ8N5I3 272 aa11.79□□□□□ -0.52
NFIX-208ENST00000587260 ABHD5Q8WTS1 349 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms