RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	THOC7	Q6I9Y2	204 aa	Known RBP	10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	OR10W1	Q8NGF6	305 aa		10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	MFSD2B	A6NFX1	497 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	DBX1	A6NMT0	343 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	PPP5D1	E7EU14	171 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	CTDSPL	O15194	276 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	CSN3	P07498	182 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	HIST1H1B	P16401	226 aa	Known RBP	10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	PI3	P19957	117 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	PPP5C	P53041	499 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	WT1-AS	Q06250	92 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	STEAP1B	Q6NZ63	245 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	GDPD1	Q8N9F7	314 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	OR1L8	Q8NGR8	309 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	MRGPRF	Q96AM1	343 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	ZNF486	Q96H40	463 aa	Predicted RBP	10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	DIRAS2	Q96HU8	199 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	SEC22A	Q96IW7	307 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	C6orf62	Q9GZU0	229 aa	Predicted RBP	10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	NDUFA4L2	Q9NRX3	87 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	TMEM14B	Q9NUH8	114 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	SIGLEC8	Q9NYZ4	499 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	NSG2	Q9Y328	171 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	CEPT1	Q9Y6K0	416 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760		S4R3C0	116 aa		10.13	□□□□□ -0.79
SREBF1-223	ENST00000584760	TEX50	A0A1B0GTY4	177 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	C15orf61	A6NNL5	157 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760		H0Y980	276 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	RAB3D	O95716	219 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	IGHV3-23	P01764	117 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	TRAPPC2	P0DI81	140 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	TRAPPC2B	P0DI82	140 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	DEFA4	P12838	97 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	PGAM2	P15259	253 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	PIGP	P57054	158 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	FAAP20	Q6NZ36	180 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	TERB2	Q8NHR7	220 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	NXF2	Q9GZY0	626 aa	Known RBP	10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	PRND	Q9UKY0	176 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	RABL2B	Q9UNT1	228 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	SMAD5-AS1	Q9Y6J3	95 aa		10.12	□□□□□ -0.79
SREBF1-223	ENST00000584760	SNAPC5	O75971	98 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	HLA-A	P01891	365 aa	Known RBP	10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	SERPINE2	P07093	398 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	OR13C7	P0DN81	318 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	IL18	Q14116	193 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	MEF2D	Q14814	521 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	TATDN3	Q17R31	274 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	OR13C8	Q8NGS7	320 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	OR5B3	Q8NH48	314 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	LSM10	Q969L4	123 aa	Known RBP	10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	EEF1AKMT3	Q96AZ1	226 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	CXorf58	Q96LI9	332 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	TP53RK	Q96S44	253 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	TSC22D3	Q99576	134 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	RBM38	Q9H0Z9	239 aa	Known RBP	10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	PEMT	Q9UBM1	199 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	OR51B2	Q9Y5P1	312 aa		10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.11	□□□□□ -0.79
SREBF1-223	ENST00000584760	TRBV7-1	A0A0A6YYK4	115 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	GSTZ1	O43708	216 aa	Predicted RBP	10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	GGCT	O75223	188 aa	Known RBP	10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	ARL3	P36405	182 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	MFAP2	P55001	183 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	SCGB2B2	Q4G0G5	96 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	CLEC19A	Q6UXS0	136 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	ADAMTSL5	Q6ZMM2	481 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	OR4C16	Q8NGL9	310 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	MCFD2	Q8NI22	146 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	ZNF502	Q8TBZ5	544 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	MARCH1	Q8TCQ1	289 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	SOST	Q9BQB4	213 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	THAP7	Q9BT49	309 aa	Predicted RBP	10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	HINT2	Q9BX68	163 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	FKBP11	Q9NYL4	201 aa		10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	F11R	Q9Y624	299 aa	Known RBP	10.1	□□□□□ -0.79
SREBF1-223	ENST00000584760	EPPK1	P58107	5090 aa	Known RBP	10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	LCE6A	A0A183	80 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	LGALS9	O00182	355 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	OR2C1	O95371	312 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	IGKV1-5	P01602	117 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	CTSD	P07339	412 aa	Predicted RBP	10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760		P0C879	139 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	LYL1	P12980	280 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	EDN2	P20800	178 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	TNFSF8	P32971	234 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	MECP2	P51608	486 aa	Known RBP	10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	H2BFWT	Q7Z2G1	175 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	GPHB5	Q86YW7	130 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	CCDC71L	Q8N9Z2	235 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	ZFAND1	Q8TCF1	268 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	PALMD	Q9NP74	551 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	THYN1	Q9P016	225 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	RYR2	Q92736	4967 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	STAB2	Q8WWQ8	2551 aa		10.09	□□□□□ -0.79
SREBF1-223	ENST00000584760	BIRC6	Q9NR09	4857 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	C3orf85	A0A1B0GTC6	90 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	ANKRD20A5P	A0PJZ0	165 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms