RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	LYG2	Q86SG7	212 aa		11.26	□□□□□ -0.61
SREBF1-222	ENST00000583732	HINT2	Q9BX68	163 aa		11.26	□□□□□ -0.61
SREBF1-222	ENST00000583732	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.26	□□□□□ -0.61
SREBF1-222	ENST00000583732	ETV7	Q9Y603	341 aa		11.26	□□□□□ -0.61
SREBF1-222	ENST00000583732	SPRY2	O43597	315 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	MRPS14	O60783	128 aa	Known RBP	11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	TRAPPC2	P0DI81	140 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	TRAPPC2B	P0DI82	140 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	OR13C7	P0DN81	318 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	RPL35A	P18077	110 aa	Known RBP	11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	PTBP1	P26599	531 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	HERV-K104	P61576	105 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	POU2AF1	Q16633	256 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	GDPD1	Q8N9F7	314 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	UBAC2	Q8NBM4	344 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	FCGR1B	Q92637	280 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	SPAG8	Q99932	426 aa	Predicted RBP	11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	C20orf24	Q9BUV8	137 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	C5orf66	Q9H5L9	145 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	AUNIP	Q9H7T9	357 aa		11.25	□□□□□ -0.61
SREBF1-222	ENST00000583732	TEX50	A0A1B0GTY4	177 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	NUPR2	A6NF83	97 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	CYB5B	O43169	146 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	RLN1	P04808	185 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	ERVK-16	P61578	105 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	WT1-AS	Q06250	92 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	ODF3L2	Q3SX64	289 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	VN1R17P	Q8TDU5	208 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	SRSF8	Q9BRL6	282 aa	Known RBP	11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	IFT46	Q9NQC8	304 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	EHF	Q9NZC4	300 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	COMMD9	Q9P000	198 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	NSG2	Q9Y328	171 aa		11.24	□□□□□ -0.61
SREBF1-222	ENST00000583732	TSPAN4	O14817	238 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	SERPINE2	P07093	398 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	BMI1	P35226	326 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	MFAP2	P55001	183 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732		Q56UQ5	140 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	LAMTOR1	Q6IAA8	161 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	OR5AP2	Q8NGF4	316 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	OR5B3	Q8NH48	314 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	GIMAP1	Q8WWP7	306 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	BSCL2	Q96G97	398 aa	Predicted RBP	11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	CHRDL1	Q9BU40	450 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	PLEKHA2	Q9HB19	425 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	DAZ1	Q9NQZ3	744 aa	Known RBP	11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	DIABLO	Q9NR28	239 aa		11.23	□□□□□ -0.61
SREBF1-222	ENST00000583732	MARCH11	A6NNE9	402 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	CTSD	P07339	412 aa	Predicted RBP	11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	GNRHR	P30968	328 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	CBX5	P45973	191 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	SCAND1	P57086	179 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	TNFRSF9	Q07011	255 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	THOC7	Q6I9Y2	204 aa	Known RBP	11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732		Q6ZWC4	215 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	WFDC3	Q8IUB2	231 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	STPG3	Q8N7X2	389 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	OR1L8	Q8NGR8	309 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	CD300LF	Q8TDQ1	290 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	C21orf62	Q9NYP8	219 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	TP53TG1	Q9Y2A0	90 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	OR51B2	Q9Y5P1	312 aa		11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	F11R	Q9Y624	299 aa	Known RBP	11.22	□□□□□ -0.61
SREBF1-222	ENST00000583732	FRAS1	Q86XX4	4008 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732		A0A0A6YYH2	397 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	OR4C46	A6NHA9	309 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732		A6NJ64	397 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	NDUFA4	O00483	81 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	KRAS	P01116	189 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	PMP2	P02689	132 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	FCGR2B	P31994	310 aa	Predicted RBP	11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	G6PC	P35575	357 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	LPAR6	P43657	344 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	NEDD8	Q15843	81 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	ZNF124	Q15973	351 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	APRG1	Q8IVJ8	170 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	SCARB1	Q8WTV0	552 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	LSM10	Q969L4	123 aa	Known RBP	11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	FXYD6	Q9H0Q3	95 aa		11.21	□□□□□ -0.61
SREBF1-222	ENST00000583732	IGKV3-7	A0A075B6H7	116 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	IGHV3-49	A0A0A0MS15	119 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732		F8W735	103 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	UBE2C	O00762	179 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	F2R	P25116	425 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	ADM	P35318	185 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	TGFBR1	P36897	503 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	TFPI2	P48307	235 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	RFX2	P48378	723 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	SPSB3	Q6PJ21	355 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	TSPAN14	Q8NG11	270 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	FCAMR	Q8WWV6	532 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	BORCS5	Q969J3	196 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	RNF183	Q96D59	192 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	NDUFA4L2	Q9NRX3	87 aa		11.2	□□□□□ -0.62
SREBF1-222	ENST00000583732	KMT2A	Q03164	3969 aa		11.19	□□□□□ -0.62
SREBF1-222	ENST00000583732		K7EIM0	57 aa		11.19	□□□□□ -0.62
SREBF1-222	ENST00000583732	PGLYRP1	O75594	196 aa	Predicted RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms