RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 TCTEX1D2Q8WW35 142 aa10.23□□□□□ -0.77
SS18-222ENST00000582792 HARBI1Q96MB7 349 aa10.23□□□□□ -0.77
SS18-222ENST00000582792 SCGB3A2Q96PL1 93 aa10.23□□□□□ -0.77
SS18-222ENST00000582792 PHB2Q99623 299 aa10.23□□□□□ -0.77
SS18-222ENST00000582792 C7orf50Q9BRJ6 194 aaKnown RBP10.23□□□□□ -0.77
SS18-222ENST00000582792 WDR12Q9GZL7 423 aaKnown RBP10.23□□□□□ -0.77
SS18-222ENST00000582792 SRD5A3Q9H8P0 318 aa10.23□□□□□ -0.77
SS18-222ENST00000582792 HRASLSQ9HDD0 168 aa10.23□□□□□ -0.77
SS18-222ENST00000582792 NAP1L6A6NFF2 107 aa10.22□□□□□ -0.77
SS18-222ENST00000582792 PGLYRP1O75594 196 aaPredicted RBP10.22□□□□□ -0.77
SS18-222ENST00000582792 CTSDP07339 412 aaPredicted RBP10.22□□□□□ -0.77
SS18-222ENST00000582792 APELAP0DMC3 54 aa10.22□□□□□ -0.77
SS18-222ENST00000582792 PPP5CP53041 499 aa10.22□□□□□ -0.77
SS18-222ENST00000582792 MRGPRG-AS1Q2M3A8 158 aa10.22□□□□□ -0.77
SS18-222ENST00000582792 SCGB2B2Q4G0G5 96 aa10.22□□□□□ -0.77
SS18-222ENST00000582792 CADM3Q8N126 398 aa10.22□□□□□ -0.77
SS18-222ENST00000582792 ADAD2Q8NCV1 583 aaKnown RBP10.22□□□□□ -0.77
SS18-222ENST00000582792 AIFM2Q9BRQ8 373 aa10.22□□□□□ -0.77
SS18-222ENST00000582792 WFDC10AQ9H1F0 79 aa10.22□□□□□ -0.77
SS18-222ENST00000582792 MSGN1A6NI15 193 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 FAM223BA6NKX1 122 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 SRRM4A7MD48 611 aaKnown RBP10.21□□□□□ -0.77
SS18-222ENST00000582792 OR11H12B2RN74 326 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 FCGR3BO75015 233 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 B3GALNT1O75752 331 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 OR9G9P0C7N8 305 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 IL7P13232 177 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 PGAM2P15259 253 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 INPP1P49441 399 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 BRWD1-AS2P59051 145 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 ZNF846Q147U1 533 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 DEFB114Q30KQ6 69 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 ZNF57Q68EA5 555 aaPredicted RBP10.21□□□□□ -0.77
SS18-222ENST00000582792 FAM223AQ8IWN6 122 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 TEX45Q8NA69 505 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 OR51S1Q8NGJ8 323 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 OR13C8Q8NGS7 320 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 DYNLRB2Q8TF09 96 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 ZC4H2Q9NQZ6 224 aa10.21□□□□□ -0.77
SS18-222ENST00000582792 SHOXO15266 292 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 TNFSF12O43508 249 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 CRYZL1O95825 349 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 HPRT1P00492 218 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 F2RP25116 425 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 UBE2KP61086 200 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 RHOGP84095 191 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 EXOSC2Q13868 293 aaKnown RBP10.2□□□□□ -0.78
SS18-222ENST00000582792 FAAP20Q6NZ36 180 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 IDO2Q6ZQW0 420 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 SPAG16Q8N0X2 631 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 CCDC71LQ8N9Z2 235 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 MRGPRFQ96AM1 343 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 SLC25A21Q9BQT8 299 aaPredicted RBP10.2□□□□□ -0.78
SS18-222ENST00000582792 PLEKHA2Q9HB19 425 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 SLC2A9Q9NRM0 540 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 COMMD9Q9P000 198 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 GPR132Q9UNW8 380 aa10.2□□□□□ -0.78
SS18-222ENST00000582792 HERC2O95714 4834 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.19□□□□□ -0.78
SS18-222ENST00000582792 TRBV9A0A0B4J1U6 114 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 CENPXA8MT69 81 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 MPPED1O15442 326 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 LY6G6CO95867 125 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 HRASP01112 189 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 PRH1P02810 166 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 TAS2R31P59538 309 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 ATP5G2Q06055 141 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 TNXAQ16473 311 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 POU2AF1Q16633 256 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 PRSS8Q16651 343 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 GUCA2BQ16661 112 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 VMA21Q3ZAQ7 101 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 PHLDA2Q53GA4 152 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 TBC1D26Q86UD7 250 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 VSTM2AQ8TAG5 236 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 MARCH1Q8TCQ1 289 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 SRSF12Q8WXF0 261 aaKnown RBP10.19□□□□□ -0.78
SS18-222ENST00000582792 MCUBQ9NWR8 336 aa10.19□□□□□ -0.78
SS18-222ENST00000582792 TECRQ9NZ01 308 aaKnown RBP10.19□□□□□ -0.78
SS18-222ENST00000582792 C14orf166Q9Y224 244 aaKnown RBP10.19□□□□□ -0.78
SS18-222ENST00000582792 C2orf70A6NJV1 201 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 CREBL2O60519 120 aaPredicted RBP10.18□□□□□ -0.78
SS18-222ENST00000582792 RLN1P04808 185 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 FGF2P09038 288 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 FOLR2P14207 255 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 RPA2P15927 270 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 EDN2P20800 178 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 PIGPP57054 158 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 OR51H1Q8NH63 302 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 OR4A5Q8NH83 315 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 WDR89Q96FK6 387 aaPredicted RBP10.18□□□□□ -0.78
SS18-222ENST00000582792 RTBDNQ9BSG5 229 aaPredicted RBP10.18□□□□□ -0.78
SS18-222ENST00000582792 COPZ2Q9P299 210 aa10.18□□□□□ -0.78
SS18-222ENST00000582792 LGALS9O00182 355 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 NQO2P16083 231 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 ZNF585BQ52M93 769 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 FAM209BQ5JX69 171 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 SLC16A13Q7RTY0 426 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 PUSL1Q8N0Z8 303 aaKnown RBP10.17□□□□□ -0.78
SS18-222ENST00000582792 NECAP1Q8NC96 275 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms