RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 FAM71E2Q8N5Q1 922 aa6.91□□□□□ -1.3
PDLIM1P3-201ENST00000582370 UXS1Q8NBZ7 420 aa6.91□□□□□ -1.3
PDLIM1P3-201ENST00000582370 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SEC22CQ9BRL7 303 aa6.91□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SLC25A33Q9BSK2 321 aa6.91□□□□□ -1.3
PDLIM1P3-201ENST00000582370 METTL1Q9UBP6 276 aaKnown RBP6.91□□□□□ -1.3
PDLIM1P3-201ENST00000582370 C5orf51A6NDU8 294 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 C15orf61A6NNL5 157 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ADARB2-AS1A8MUL3 147 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 WRBO00258 174 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 UPK2O00526 184 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ST8SIA3O43173 380 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 P0C879 139 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SAA1P0DJI8 122 aaPredicted RBP6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 G6PCP35575 357 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 BCAP31P51572 246 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SUB1P53999 127 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 KRTAP10-11P60412 298 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SPCS3P61009 180 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PRSS8Q16651 343 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 IAH1Q2TAA2 248 aaPredicted RBP6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 GGNBP1Q5YKI7 109 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 LYZL2Q7Z4W2 148 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 DYNAPQ8N1N2 210 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 OR52B4Q8NGK2 314 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 OR1L8Q8NGR8 309 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 OR1S1Q8NH92 325 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PIFOQ8TCI5 191 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 RCC1LQ96I51 464 aaKnown RBP6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 FYTTD1Q96QD9 318 aaKnown RBP6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 RAB40CQ96S21 281 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PRSS22Q9GZN4 317 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 HIPK2Q9H2X6 1198 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ENY2Q9NPA8 101 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TMEM14BQ9NUH8 114 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 MGAT4CQ9UBM8 478 aa6.9□□□□□ -1.3
PDLIM1P3-201ENST00000582370 IGHV3-72A0A0B4J1Y9 119 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 A0A0B4J293 547 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CORTO00230 105 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 GOSR2O14653 212 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SLC25A17O43808 307 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PITX3O75364 302 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CNIH1O95406 144 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 IFNA17P01571 189 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 IGKV1-39P01597 117 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 IGKV1-5P01602 117 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 IGLV2-23P01705 113 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 IGKV1D-39P04432 117 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CRYGBP07316 175 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HOXB5P09067 269 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 NKX2-1P43699 371 aaPredicted RBP6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TAS2R30P59541 319 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HSPE1P61604 102 aaKnown RBP6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ERHP84090 104 aaKnown RBP6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PRB3Q04118 309 aaPredicted RBP6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 FAM209BQ5JX69 171 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 C5orf56Q8N8D9 126 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 LHFPL5Q8TAF8 219 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 C17orf50Q8WW18 174 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 DPF1Q92782 380 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 GPHA2Q96T91 129 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 QTRT1Q9BXR0 403 aaKnown RBP6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 GPR61Q9BZJ8 451 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ZNF436Q9C0F3 470 aaPredicted RBP6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PLSCR3Q9NRY6 295 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HSPB7Q9UBY9 170 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CACNG5Q9UF02 275 aa6.89□□□□□ -1.31
PDLIM1P3-201ENST00000582370 C13orf42A0A1B0GVH6 325 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 FAM25EA8MYX2 175 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 BRI3O95415 125 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 IGF1P05019 195 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CD28P10747 220 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PRCDQ00LT1 54 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ID3Q02535 119 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TNFRSF9Q07011 255 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 AKIRIN2Q53H80 203 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 AKAP14Q86UN6 197 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 Q8N9W7 124 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ZBTB8BQ8NAP8 495 aaPredicted RBP6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 THAP6Q8TBB0 222 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PPP1R14BQ96C90 147 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 GPR146Q96CH1 333 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CITED2Q99967 270 aaPredicted RBP6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ZNF430Q9H8G1 570 aaPredicted RBP6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PLEKHA3Q9HB20 300 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 THYN1Q9P016 225 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 OR51B2Q9Y5P1 312 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 WSB1Q9Y6I7 421 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 U3KQ87 197 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 RYR1P21817 5038 aa6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PLECQ15149 4684 aaKnown RBP6.88□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SRRM4A7MD48 611 aaKnown RBP6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 E5RGE8 158 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 H3BUA1 57 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 AP4M1O00189 453 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SYNGR2O43760 224 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ADAP1O75689 374 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 IGHG2P01859 326 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PF4V1P10720 104 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PSMB6P28072 239 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms