RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ELANEP08246 267 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 APELAP0DMC3 54 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 PSMB8P28062 276 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 CHRNA7P36544 502 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 FOXE3Q13461 319 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 HIST2H2BDQ6DRA6 164 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 THOC7Q6I9Y2 204 aaKnown RBP11.8□□□□□ -0.52
MKS1-210ENST00000581180 TTC9CQ8N5M4 171 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 C11orf44Q8N8P7 122 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 OR5M8Q8NGP6 311 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 COQ8AQ8NI60 647 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 RNASE11Q8TAA1 199 aaKnown RBP11.8□□□□□ -0.52
MKS1-210ENST00000581180 ZNF431Q8TF32 576 aaPredicted RBP11.8□□□□□ -0.52
MKS1-210ENST00000581180 PHB2Q99623 299 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 SRSF8Q9BRL6 282 aaKnown RBP11.8□□□□□ -0.52
MKS1-210ENST00000581180 CACNG5Q9UF02 275 aa11.8□□□□□ -0.52
MKS1-210ENST00000581180 IGLC7A0M8Q6 106 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 ST8SIA3O43173 380 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 BRI3O95415 125 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 TRAPPC2P0DI81 140 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 TRAPPC2BP0DI82 140 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 AREGP15514 252 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 HSPE1P61604 102 aaKnown RBP11.79□□□□□ -0.52
MKS1-210ENST00000581180 SHISA2Q6UWI4 295 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 OR5T1Q8NG75 326 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 OR4X2Q8NGF9 303 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 FAM110DQ8TAY7 271 aaPredicted RBP11.79□□□□□ -0.52
MKS1-210ENST00000581180 MYOZ3Q8TDC0 251 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.79□□□□□ -0.52
MKS1-210ENST00000581180 COA4Q9NYJ1 87 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 TMED3Q9Y3Q3 217 aa11.79□□□□□ -0.52
MKS1-210ENST00000581180 NPIPB5A8MRT5 1133 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 CRYGCP07315 174 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 HOXB5P09067 269 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 SULT1A3P0DMM9 295 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 SULT1A4P0DMN0 295 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 CTRB1P17538 263 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 PRCDQ00LT1 54 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 KIAA0141Q14154 515 aaPredicted RBP11.78□□□□□ -0.52
MKS1-210ENST00000581180 GGNBP1Q5YKI7 109 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 CTRB2Q6GPI1 263 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 LCNL1Q6ZST4 164 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 OR10W1Q8NGF6 305 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 OR52E5Q8NH55 327 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 CITED2Q99967 270 aaPredicted RBP11.78□□□□□ -0.52
MKS1-210ENST00000581180 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 DNHD1Q96M86 4753 aa11.78□□□□□ -0.52
MKS1-210ENST00000581180 A0A1B0GU03 582 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 ADARB2-AS1A8MUL3 147 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 H3BUA1 57 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 PRAF2O60831 178 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 PITX3O75364 302 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 RBMXL2O75526 392 aaKnown RBP11.77□□□□□ -0.53
MKS1-210ENST00000581180 ADAP1O75689 374 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.53
MKS1-210ENST00000581180 SLC25A6P12236 298 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 PSMB6P28072 239 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 RAB9AP51151 201 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 WT1-ASQ06250 92 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 SMCO1Q147U7 214 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 KLK9Q2XQG4 91 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 PDLIM3Q53GG5 364 aaPredicted RBP11.77□□□□□ -0.53
MKS1-210ENST00000581180 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
MKS1-210ENST00000581180 HSD17B13Q7Z5P4 300 aaPredicted RBP11.77□□□□□ -0.53
MKS1-210ENST00000581180 HINT2Q9BX68 163 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 KLK9Q9UKQ9 250 aa11.77□□□□□ -0.53
MKS1-210ENST00000581180 TRRAPQ9Y4A5 3859 aa11.76□□□□□ -0.53
MKS1-210ENST00000581180 TCRBV4S1A1TA0A5B7 111 aa11.76□□□□□ -0.53
MKS1-210ENST00000581180 INS-IGF2F8WCM5 200 aa11.76□□□□□ -0.53
MKS1-210ENST00000581180 DHFRP00374 187 aa11.76□□□□□ -0.53
MKS1-210ENST00000581180 PF4V1P10720 104 aa11.76□□□□□ -0.53
MKS1-210ENST00000581180 C19orf35Q6ZS72 473 aa11.76□□□□□ -0.53
MKS1-210ENST00000581180 C12orf45Q8N5I9 185 aaPredicted RBP11.76□□□□□ -0.53
MKS1-210ENST00000581180 ZFP57Q9NU63 452 aa11.76□□□□□ -0.53
MKS1-210ENST00000581180 TSSC4Q9Y5U2 329 aaPredicted RBP11.76□□□□□ -0.53
MKS1-210ENST00000581180 TRBV9A0A0B4J1U6 114 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 MPTX1A8MV57 137 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 SNRPGP15A8MWD9 76 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 IFNA17P01571 189 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 REG1AP05451 166 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 OR13C7P0DN81 318 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 SPCS3P61009 180 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 RPL23AP62750 156 aaKnown RBP11.75□□□□□ -0.53
MKS1-210ENST00000581180 RGS21Q2M5E4 152 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 SPINK9Q5DT21 86 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 NDUFA11Q86Y39 141 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 OR2C3Q8N628 320 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 ZNF491Q8N8L2 437 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 FANCD2OSQ96PS1 177 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 SLA2Q9H6Q3 261 aa11.75□□□□□ -0.53
MKS1-210ENST00000581180 GPN1Q9HCN4 374 aaPredicted RBP11.75□□□□□ -0.53
MKS1-210ENST00000581180 PRH1P02810 166 aa11.74□□□□□ -0.53
MKS1-210ENST00000581180 TRGV3P03979 118 aa11.74□□□□□ -0.53
MKS1-210ENST00000581180 CDX1P47902 265 aaPredicted RBP11.74□□□□□ -0.53
MKS1-210ENST00000581180 OXA1LQ15070 435 aa11.74□□□□□ -0.53
MKS1-210ENST00000581180 TMEM65Q6PI78 240 aa11.74□□□□□ -0.53
MKS1-210ENST00000581180 C18orf65Q6ZTR6 163 aa11.74□□□□□ -0.53
MKS1-210ENST00000581180 MS4A10Q96PG2 267 aa11.74□□□□□ -0.53
MKS1-210ENST00000581180 PDCD10Q9BUL8 212 aa11.74□□□□□ -0.53
MKS1-210ENST00000581180 PLEKHA3Q9HB20 300 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms