RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 COA4Q9NYJ1 87 aa15.85■□□□□ 0.13
SNX11-207ENST00000580875 SIGLEC8Q9NYZ4 499 aa15.85■□□□□ 0.13
SNX11-207ENST00000580875 RBM7Q9Y580 266 aaKnown RBP15.85■□□□□ 0.13
SNX11-207ENST00000580875 SACSQ9NZJ4 4579 aa15.85■□□□□ 0.13
SNX11-207ENST00000580875 SHOXO15266 292 aa15.84■□□□□ 0.13
SNX11-207ENST00000580875 CSN3P07498 182 aa15.84■□□□□ 0.13
SNX11-207ENST00000580875 PI3P19957 117 aa15.84■□□□□ 0.13
SNX11-207ENST00000580875 DEFA5Q01523 94 aa15.84■□□□□ 0.13
SNX11-207ENST00000580875 RPEL1Q2QD12 228 aa15.84■□□□□ 0.13
SNX11-207ENST00000580875 TMEM177Q53S58 311 aa15.84■□□□□ 0.13
SNX11-207ENST00000580875 CCDC71LQ8N9Z2 235 aa15.84■□□□□ 0.13
SNX11-207ENST00000580875 ZNF486Q96H40 463 aaPredicted RBP15.84■□□□□ 0.13
SNX11-207ENST00000580875 SEC22CQ9BRL7 303 aa15.84■□□□□ 0.13
SNX11-207ENST00000580875 TUBA4BQ9H853 241 aa15.84■□□□□ 0.13
SNX11-207ENST00000580875 IGKV1D-13A0A0B4J2D9 117 aa15.83■□□□□ 0.12
SNX11-207ENST00000580875 SRRM4A7MD48 611 aaKnown RBP15.83■□□□□ 0.12
SNX11-207ENST00000580875 CREBL2O60519 120 aaPredicted RBP15.83■□□□□ 0.12
SNX11-207ENST00000580875 TRBV12-3P01733 135 aa15.83■□□□□ 0.12
SNX11-207ENST00000580875 OR4E1P0C645 316 aa15.83■□□□□ 0.12
SNX11-207ENST00000580875 IGKV1-13P0DP09 117 aa15.83■□□□□ 0.12
SNX11-207ENST00000580875 RRASP10301 218 aa15.83■□□□□ 0.12
SNX11-207ENST00000580875 AKR1C4P17516 323 aa15.83■□□□□ 0.12
SNX11-207ENST00000580875 CADM3Q8N126 398 aa15.83■□□□□ 0.12
SNX11-207ENST00000580875 ADAD2Q8NCV1 583 aaKnown RBP15.83■□□□□ 0.12
SNX11-207ENST00000580875 RTBDNQ9BSG5 229 aaPredicted RBP15.83■□□□□ 0.12
SNX11-207ENST00000580875 MSGN1A6NI15 193 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 SNRPGP15A8MWD9 76 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 GPR31O00270 319 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 OR2A4O95047 310 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 APELAP0DMC3 54 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 S100GP29377 79 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 MRGPRG-AS1Q2M3A8 158 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 VMA21Q3ZAQ7 101 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 TMEM128Q5BJH2 165 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 TEX45Q8NA69 505 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 TMEM230Q96A57 120 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 C5orf30Q96GV9 206 aa15.82■□□□□ 0.12
SNX11-207ENST00000580875 HLA-AP01891 365 aaKnown RBP15.81■□□□□ 0.12
SNX11-207ENST00000580875 OR9G9P0C7N8 305 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 VAMP1P23763 118 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 PIGPP57054 158 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 UBE2KP61086 200 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 PPP1R1AQ13522 171 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 PRSS8Q16651 343 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 PHLDA2Q53GA4 152 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 ADAMTSL5Q6ZMM2 481 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 LYG2Q86SG7 212 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 CMTM1Q8IZ96 169 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 ZNF431Q8TF32 576 aaPredicted RBP15.81■□□□□ 0.12
SNX11-207ENST00000580875 SLC2A9Q9NRM0 540 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 PEMTQ9UBM1 199 aa15.81■□□□□ 0.12
SNX11-207ENST00000580875 RBMXL2O75526 392 aaKnown RBP15.8■□□□□ 0.12
SNX11-207ENST00000580875 RND3P61587 244 aa15.8■□□□□ 0.12
SNX11-207ENST00000580875 DHODHQ02127 395 aa15.8■□□□□ 0.12
SNX11-207ENST00000580875 DHRS2Q13268 280 aa15.8■□□□□ 0.12
SNX11-207ENST00000580875 OR52B4Q8NGK2 314 aa15.8■□□□□ 0.12
SNX11-207ENST00000580875 SRSF12Q8WXF0 261 aaKnown RBP15.8■□□□□ 0.12
SNX11-207ENST00000580875 ADTRPQ96IZ2 230 aa15.8■□□□□ 0.12
SNX11-207ENST00000580875 CCL28Q9NRJ3 127 aa15.8■□□□□ 0.12
SNX11-207ENST00000580875 LYSTQ99698 3801 aa15.8■□□□□ 0.12
SNX11-207ENST00000580875 TEX13DA0A0J9YY54 714 aaPredicted RBP15.79■□□□□ 0.12
SNX11-207ENST00000580875 C9orf170A2RU37 121 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 IZUMO1RA6ND01 250 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 CRYM-AS1A6NIL9 109 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 MPPED1O15442 326 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 SSNA1O43805 119 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 SLC22A5O76082 557 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 GNRHRP30968 328 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 RRAS2P62070 204 aaPredicted RBP15.79■□□□□ 0.12
SNX11-207ENST00000580875 MSMO1Q15800 293 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 TNXAQ16473 311 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 ZNF818PQ6ZRF7 136 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 ZNF645Q8N7E2 425 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 OR2K2Q8NGT1 345 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 DDB2Q92466 427 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 MED28Q9H204 178 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 NAA60Q9H7X0 242 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 STARD9Q9P2P6 4700 aa15.79■□□□□ 0.12
SNX11-207ENST00000580875 FAM223BA6NKX1 122 aa15.78■□□□□ 0.12
SNX11-207ENST00000580875 SFT2D2O95562 160 aa15.78■□□□□ 0.12
SNX11-207ENST00000580875 CRYZL1O95825 349 aa15.78■□□□□ 0.12
SNX11-207ENST00000580875 TRAPPC2P0DI81 140 aa15.78■□□□□ 0.12
SNX11-207ENST00000580875 TRAPPC2BP0DI82 140 aa15.78■□□□□ 0.12
SNX11-207ENST00000580875 DUTP33316 252 aaKnown RBP15.78■□□□□ 0.12
SNX11-207ENST00000580875 RHOGP84095 191 aa15.78■□□□□ 0.12
SNX11-207ENST00000580875 FAM223AQ8IWN6 122 aa15.78■□□□□ 0.12
SNX11-207ENST00000580875 OSR1Q8TAX0 266 aaPredicted RBP15.78■□□□□ 0.12
SNX11-207ENST00000580875 CHAC2Q8WUX2 184 aa15.78■□□□□ 0.12
SNX11-207ENST00000580875 HMX3A6NHT5 357 aa15.77■□□□□ 0.12
SNX11-207ENST00000580875 BMPR1BO00238 502 aa15.77■□□□□ 0.12
SNX11-207ENST00000580875 PFDN1O60925 122 aa15.77■□□□□ 0.12
SNX11-207ENST00000580875 ANXA3P12429 323 aa15.77■□□□□ 0.12
SNX11-207ENST00000580875 ATP5G2Q06055 141 aa15.77■□□□□ 0.12
SNX11-207ENST00000580875 EXOSC2Q13868 293 aaKnown RBP15.77■□□□□ 0.12
SNX11-207ENST00000580875 ZBTB34Q8NCN2 500 aa15.77■□□□□ 0.12
SNX11-207ENST00000580875 KCNIP3Q9Y2W7 256 aa15.77■□□□□ 0.12
SNX11-207ENST00000580875 TRBV9A0A0B4J1U6 114 aa15.76■□□□□ 0.11
SNX11-207ENST00000580875 LINC00473A8K010 186 aa15.76■□□□□ 0.11
SNX11-207ENST00000580875 ACTL6BO94805 426 aa15.76■□□□□ 0.11
SNX11-207ENST00000580875 CD81P60033 236 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms