RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CIB3Q96Q77 187 aaPredicted RBP11.27□□□□□ -0.61
SKA2-205ENST00000580541 PLEKHA3Q9HB20 300 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 RNF114Q9Y508 228 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 SETD2Q9BYW2 2564 aaPredicted RBP11.26□□□□□ -0.61
SKA2-205ENST00000580541 C2CD3Q4AC94 2353 aa11.26□□□□□ -0.61
SKA2-205ENST00000580541 CEBPZOSA8MTT3 80 aa11.26□□□□□ -0.61
SKA2-205ENST00000580541 GOSR2O14653 212 aa11.26□□□□□ -0.61
SKA2-205ENST00000580541 PITX3O75364 302 aa11.26□□□□□ -0.61
SKA2-205ENST00000580541 NKX2-1P43699 371 aaPredicted RBP11.26□□□□□ -0.61
SKA2-205ENST00000580541 RPP30P78346 268 aaKnown RBP11.26□□□□□ -0.61
SKA2-205ENST00000580541 TNFRSF9Q07011 255 aa11.26□□□□□ -0.61
SKA2-205ENST00000580541 Q6ZS46 218 aa11.26□□□□□ -0.61
SKA2-205ENST00000580541 LFNGQ8NES3 379 aa11.26□□□□□ -0.61
SKA2-205ENST00000580541 MGAT4CQ9UBM8 478 aa11.26□□□□□ -0.61
SKA2-205ENST00000580541 HSPB7Q9UBY9 170 aa11.26□□□□□ -0.61
SKA2-205ENST00000580541 TMEM89A2RUT3 159 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 PSMB11A5LHX3 300 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 LINC01548A6NM66 108 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 INS-IGF2F8WCM5 200 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 RLN2P04090 185 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 DEFA4P12838 97 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 SNCAP37840 140 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 HOXA1P49639 335 aaPredicted RBP11.25□□□□□ -0.61
SKA2-205ENST00000580541 ATP5IP56385 69 aaPredicted RBP11.25□□□□□ -0.61
SKA2-205ENST00000580541 RRAS2P62070 204 aaPredicted RBP11.25□□□□□ -0.61
SKA2-205ENST00000580541 ID3Q02535 119 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 ECSCRQ19T08 205 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 TEX38Q6PEX7 206 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 TMEM65Q6PI78 240 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 Q6ZNX1 250 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 TTC9CQ8N5M4 171 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 ZBTB8BQ8NAP8 495 aaPredicted RBP11.25□□□□□ -0.61
SKA2-205ENST00000580541 OR10C1Q96KK4 312 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 FAM103A1Q9BTL3 118 aaKnown RBP11.25□□□□□ -0.61
SKA2-205ENST00000580541 NMES1Q9C002 83 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 HEYLQ9NQ87 328 aaPredicted RBP11.25□□□□□ -0.61
SKA2-205ENST00000580541 SERTAD4Q9NUC0 356 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 WSB1Q9Y6I7 421 aa11.25□□□□□ -0.61
SKA2-205ENST00000580541 NPIPB5A8MRT5 1133 aa11.24□□□□□ -0.61
SKA2-205ENST00000580541 H3BUA1 57 aa11.24□□□□□ -0.61
SKA2-205ENST00000580541 CCSO14618 274 aa11.24□□□□□ -0.61
SKA2-205ENST00000580541 OR13C7P0DN81 318 aa11.24□□□□□ -0.61
SKA2-205ENST00000580541 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
SKA2-205ENST00000580541 HIST1H1BP16401 226 aaKnown RBP11.24□□□□□ -0.61
SKA2-205ENST00000580541 PVALBP20472 110 aaPredicted RBP11.24□□□□□ -0.61
SKA2-205ENST00000580541 SSBP2P81877 361 aaPredicted RBP11.24□□□□□ -0.61
SKA2-205ENST00000580541 SRSF2Q01130 221 aaKnown RBP11.24□□□□□ -0.61
SKA2-205ENST00000580541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
SKA2-205ENST00000580541 OR4D5Q8NGN0 318 aa11.24□□□□□ -0.61
SKA2-205ENST00000580541 THYN1Q9P016 225 aa11.24□□□□□ -0.61
SKA2-205ENST00000580541 U3KQ87 197 aa11.24□□□□□ -0.61
SKA2-205ENST00000580541 HMX3A6NHT5 357 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 MPTX1A8MV57 137 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 TEX22C9J3V5 150 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 SYNGR2O43760 224 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 CRYGCP07315 174 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 ELANEP08246 267 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 PET100P0DJ07 73 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 PSMB6P28072 239 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 HTR2BP41595 481 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 NDPQ00604 133 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 CXorf66Q5JRM2 361 aaPredicted RBP11.23□□□□□ -0.61
SKA2-205ENST00000580541 C10orf55Q5SWW7 151 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 OR4X2Q8NGF9 303 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 FAM110DQ8TAY7 271 aaPredicted RBP11.23□□□□□ -0.61
SKA2-205ENST00000580541 DTD1Q8TEA8 209 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 NOL4LQ96MY1 436 aaPredicted RBP11.23□□□□□ -0.61
SKA2-205ENST00000580541 RAB40CQ96S21 281 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 WNT10AQ9GZT5 417 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 SLA2Q9H6Q3 261 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 ZNF355PQ9NSJ1 428 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 LINC00527Q9UJ94 153 aa11.23□□□□□ -0.61
SKA2-205ENST00000580541 TET2Q6N021 2002 aaPredicted RBP11.23□□□□□ -0.61
SKA2-205ENST00000580541 IGLC7A0M8Q6 106 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 E7EUB6 86 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 G3V318 75 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 BRI3O95415 125 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 SCGB1D2O95969 90 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 IGHG4P01861 327 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 MYOD1P15172 320 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 MDKP21741 143 aaPredicted RBP11.22□□□□□ -0.61
SKA2-205ENST00000580541 FOXE3Q13461 319 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 OR2C3Q8N628 320 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 KLHDC1Q8N7A1 406 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 OR5T1Q8NG75 326 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 OR5AU1Q8NGC0 362 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 OR10W1Q8NGF6 305 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 C19orf24Q9BVV8 132 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 RBKSQ9H477 322 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 FBXO7Q9Y3I1 522 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 NF1P21359 2839 aa11.22□□□□□ -0.61
SKA2-205ENST00000580541 A0A0G2JLM5 398 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 L7N2F9 121 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 CORTO00230 105 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 CTRB1P17538 263 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 PPIFP30405 207 aaKnown RBP11.21□□□□□ -0.61
SKA2-205ENST00000580541 TAS2R30P59541 319 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 VAMP2P63027 116 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 SRSF4Q08170 494 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms