RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 TCTAP57738 103 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 NANOS2P60321 138 aaKnown RBP6.29□□□□□ -1.4
CASC3-206ENST00000579238 PRR20EP86478 221 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 PRR20CP86479 221 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 PRR20DP86480 221 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 PRR20BP86481 221 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 PRR20AP86496 221 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 CATR1Q13166 79 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 RBMS2Q15434 407 aaKnown RBP6.29□□□□□ -1.4
CASC3-206ENST00000579238 SLC25A24Q6NUK1 477 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 ZNF367Q7RTV3 350 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 HSD17B13Q7Z5P4 300 aaPredicted RBP6.29□□□□□ -1.4
CASC3-206ENST00000579238 NR2C2APQ86WQ0 139 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 GDPD1Q8N9F7 314 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 C11orf45Q8TAV5 145 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 SECTM1Q8WVN6 248 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 RARRES2Q99969 163 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 C20orf24Q9BUV8 137 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 CCL28Q9NRJ3 127 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 FBXL17Q9UF56 701 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 HECTD4Q9Y4D8 3996 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 C15orf62A8K5M9 175 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 NOTOA8MTQ0 251 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 SERPINE2P07093 398 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 TRAPPC2P0DI81 140 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 TRAPPC2BP0DI82 140 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 OR13C7P0DN81 318 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 FCGR2CP31995 323 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 ADMP35318 185 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 ARPC4P59998 168 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 TBCEQ15813 527 aaPredicted RBP6.28□□□□□ -1.4
CASC3-206ENST00000579238 ZNF773Q6PK81 442 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 APRG1Q8IVJ8 170 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 DMBX1Q8NFW5 382 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 OR10W1Q8NGF6 305 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 OR1L8Q8NGR8 309 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 OR13F1Q8NGS4 319 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 OR11H2Q8NH07 326 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 C2CD4CQ8TF44 421 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 CHRDL1Q9BU40 450 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 SLC5A7Q9GZV3 580 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 PLEKHA2Q9HB19 425 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 TMEM140Q9NV12 185 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 NDUFB11Q9NX14 153 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 C21orf62Q9NYP8 219 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 SMPXQ9UHP9 88 aa6.28□□□□□ -1.4
CASC3-206ENST00000579238 IGHV3OR16-8A0A075B7F1 116 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 TEX50A0A1B0GTY4 177 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 SMIM30A4D0T7 59 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 F8W735 103 aaPredicted RBP6.27□□□□□ -1.41
CASC3-206ENST00000579238 CHEK1O14757 476 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 ZNF207O43670 478 aaKnown RBP6.27□□□□□ -1.41
CASC3-206ENST00000579238 PPYP01298 95 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 MFAP2P55001 183 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 AQP4P55087 323 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 WT1-ASQ06250 92 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 C22orf42Q6IC83 251 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 BEST4Q8NFU0 473 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 SCARB1Q8WTV0 552 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 RNF2Q99496 336 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 NDUFA4L2Q9NRX3 87 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 COMMD9Q9P000 198 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 ETV7Q9Y603 341 aa6.27□□□□□ -1.41
CASC3-206ENST00000579238 F11RQ9Y624 299 aaKnown RBP6.27□□□□□ -1.41
CASC3-206ENST00000579238 IGHV3-21A0A0B4J1V1 117 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 IGHV7-4-1A0A0J9YVY3 117 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 K7EIM0 57 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 MRPS14O60783 128 aaKnown RBP6.26□□□□□ -1.41
CASC3-206ENST00000579238 PTHLHP12272 177 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 TFPI2P48307 235 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 FXYD4P59646 89 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 ERVK-16P61578 105 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 RELQ04864 619 aaPredicted RBP6.26□□□□□ -1.41
CASC3-206ENST00000579238 ZNF124Q15973 351 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 Q56UQ5 140 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 AADACL3Q5VUY0 350 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 HOGA1Q86XE5 327 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 UBAC2Q8NBM4 344 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 TMEM116Q8NCL8 245 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 OR51H1Q8NH63 302 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 LSM10Q969L4 123 aaKnown RBP6.26□□□□□ -1.41
CASC3-206ENST00000579238 CMTM3Q96MX0 182 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 RHPN1-AS1Q9BWJ2 59 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 DAPK2Q9UIK4 370 aa6.26□□□□□ -1.41
CASC3-206ENST00000579238 IGKV3-7A0A075B6H7 116 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 MARCH11A6NNE9 402 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 IGLL5B9A064 214 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 C11orf94C9JXX5 98 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 NUPL2O15504 423 aaKnown RBP6.25□□□□□ -1.41
CASC3-206ENST00000579238 CA1P00915 261 aaPredicted RBP6.25□□□□□ -1.41
CASC3-206ENST00000579238 CTSGP08311 255 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 FGF9P31371 208 aaPredicted RBP6.25□□□□□ -1.41
CASC3-206ENST00000579238 PAFAH1B2P68402 229 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 TMEM187Q14656 261 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 FAM90A2PQ658T7 463 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 ZNF818PQ6ZRF7 136 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 LINC00336Q6ZUF6 198 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 TPRA1Q86W33 373 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 CADM3Q8N126 398 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 GVQW1Q8N7I0 195 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms