RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 IGHV3-21A0A0B4J1V1 117 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 IGLC7A0M8Q6 106 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 MARCH11A6NNE9 402 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 A8MWP6 167 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 XRCC3O43542 346 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR13C7P0DN81 318 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 GNRHRP30968 328 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TAS2R20P59543 309 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SLC25A24Q6NUK1 477 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 LINC00322Q6ZN03 302 aaPredicted RBP6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CROCCP3Q8IVE0 287 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SAMD12Q8N8I0 201 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 UBAC2Q8NBM4 344 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 PLEKHA2Q9HB19 425 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 COMMD9Q9P000 198 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 NSG2Q9Y328 171 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 UFC1Q9Y3C8 167 aa6.92□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TEX50A0A1B0GTY4 177 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR2T8A6NH00 312 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ZNF701M0R085 212 aaPredicted RBP6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TGOLN2O43493 480 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 PGLYRP1O75594 196 aaPredicted RBP6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 KRASP01116 189 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TRAPPC2P0DI81 140 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TRAPPC2BP0DI82 140 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 F2RP25116 425 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 HLA-DMAP28067 261 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 G6PCP35575 357 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RPS19P39019 145 aaKnown RBP6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 LPAR6P43657 344 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TAS2R46P59540 309 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 POU2AF1Q16633 256 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ANKRD55Q3KP44 614 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 PHLDA2Q53GA4 152 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CMTM1Q8IZ96 169 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 GDPD1Q8N9F7 314 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR1L6Q8NGR2 347 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ZNF502Q8TBZ5 544 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 FCAMRQ8WWV6 532 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 MOB3AQ96BX8 217 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 DGCR14Q96DF8 476 aaKnown RBP6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SRSF8Q9BRL6 282 aaKnown RBP6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 FXYD6Q9H0Q3 95 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 VCX3AQ9NNX9 186 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 UBQLN2Q9UHD9 624 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
CDK5RAP3-211ENST00000578996 IGHV3OR16-8A0A075B7F1 116 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 LOC102724200A0A096LPH7 203 aaPredicted RBP6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 GPR31O00270 319 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TMEM127O75204 238 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SNAPC5O75971 98 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 JTBO76095 146 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SERPINE2P07093 398 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 PTBP1P26599 531 aaKnown RBP eCLIP6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 PRSS3P35030 304 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 HRH1P35367 487 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TSPAN5P62079 268 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 WT1-ASQ06250 92 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 Q56UQ5 140 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 THOC7Q6I9Y2 204 aaKnown RBP6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR1L8Q8NGR8 309 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR6F1Q8NGZ6 308 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 IL17DQ8TAD2 202 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 LSM10Q969L4 123 aaKnown RBP6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 MARC2Q969Z3 335 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 C20orf24Q9BUV8 137 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 GGTLC1Q9BX51 225 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RBM38Q9H0Z9 239 aaKnown RBP6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 MRPL27Q9P0M9 148 aaKnown RBP6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 COMMD3Q9UBI1 195 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR51B2Q9Y5P1 312 aa6.9□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TNCP24821 2201 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 ZNF207O43670 478 aaKnown RBP6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 EIF4EP06730 217 aaKnown RBP6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 S100GP29377 79 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 KLK9Q2XQG4 91 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 DHRS11Q6UWP2 260 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 HSD17B13Q7Z5P4 300 aaPredicted RBP6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 SNX29P2Q8IUI4 249 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 SLC38A6Q8IZM9 456 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 VN1R17PQ8TDU5 208 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 YIPF6Q96EC8 236 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 BSCL2Q96G97 398 aaPredicted RBP6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TMEM56Q96MV1 263 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 ZNF436Q9C0F3 470 aaPredicted RBP6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 C21orf62Q9NYP8 219 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 KLK9Q9UKQ9 250 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 ANAPC10Q9UM13 185 aa6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 F11RQ9Y624 299 aaKnown RBP6.89□□□□□ -1.31
CDK5RAP3-211ENST00000578996 DNAH1Q9P2D7 4330 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 FGF2P09038 288 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 MFAP2P55001 183 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 ELLP55199 621 aaPredicted RBP6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 NCS1P62166 190 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 PMS2P11Q13670 270 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 RNASE12Q5GAN4 147 aaKnown RBP6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 LAMTOR1Q6IAA8 161 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TBC1D26Q86UD7 250 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 OR2C3Q8N628 320 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms