RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 TSPAN5P62079 268 aa13.22□□□□□ -0.29
SLC9A3R1-203ENST00000578958 RBPMS2Q6ZRY4 209 aaKnown RBP13.22□□□□□ -0.29
SLC9A3R1-203ENST00000578958 OR52B4Q8NGK2 314 aa13.22□□□□□ -0.29
SLC9A3R1-203ENST00000578958 YIPF6Q96EC8 236 aa13.22□□□□□ -0.29
SLC9A3R1-203ENST00000578958 UFC1Q9Y3C8 167 aa13.22□□□□□ -0.29
SLC9A3R1-203ENST00000578958 TMEM213A2RRL7 107 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 GPR31O00270 319 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 SCAF4O95104 1147 aaKnown RBP13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 KRASP01116 189 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 FGF2P09038 288 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 PTBP1P26599 531 aaKnown RBP eCLIP13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 HLA-DMAP28067 261 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 KLK9Q2XQG4 91 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 OR10W1Q8NGF6 305 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 MARC2Q969Z3 335 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 DGCR14Q96DF8 476 aaKnown RBP13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 RETNQ9HD89 108 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 COMMD3Q9UBI1 195 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 KLK9Q9UKQ9 250 aa13.21□□□□□ -0.29
SLC9A3R1-203ENST00000578958 IGHV3-35A0A0C4DH35 117 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 TEX50A0A1B0GTY4 177 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 A8MWP6 167 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 HRH1P35367 487 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 ZNF585BQ52M93 769 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 TM4SF20Q53R12 229 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 LPCAT3Q6P1A2 487 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 BTNL8Q6UX41 500 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 TMEM61Q8N0U2 210 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 GDPD1Q8N9F7 314 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 IL17DQ8TAD2 202 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 ZNF502Q8TBZ5 544 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 VN1R17PQ8TDU5 208 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 SLC25A46Q96AG3 418 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 FAM110AQ9BQ89 295 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 WFDC10AQ9H1F0 79 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 HIPK2Q9H2X6 1198 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 FKBP11Q9NYL4 201 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 MLXQ9UH92 298 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 OR51B2Q9Y5P1 312 aa13.2□□□□□ -0.3
SLC9A3R1-203ENST00000578958 RBMY1BA6NDE4 496 aaKnown RBP13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 RBMY1EA6NEQ0 496 aaKnown RBP13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 SERPINE2P07093 398 aa13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 RBMY1DP0C7P1 496 aaKnown RBP13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 NAT1P18440 290 aa13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 G6PCP35575 357 aa13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 PHLDA2Q53GA4 152 aa13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 FCAMRQ8WWV6 532 aa13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 LSM10Q969L4 123 aaKnown RBP13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 TMEM56Q96MV1 263 aa13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 MRPL27Q9P0M9 148 aaKnown RBP13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 ANAPC10Q9UM13 185 aa13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 NSG2Q9Y328 171 aa13.19□□□□□ -0.3
SLC9A3R1-203ENST00000578958 OR2T8A6NH00 312 aa13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 TGOLN2O43493 480 aa13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 EIF4EP06730 217 aaKnown RBP13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 ELLP55199 621 aaPredicted RBP13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 UNQ9165/PRO28630Q6UXU0 137 aa13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 LINC00322Q6ZN03 302 aaPredicted RBP13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 SNX29P2Q8IUI4 249 aa13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 SLC38A6Q8IZM9 456 aa13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 TSC22D3Q99576 134 aa13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 FXYD6Q9H0Q3 95 aa13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 PRNDQ9UKY0 176 aa13.18□□□□□ -0.3
SLC9A3R1-203ENST00000578958 DYNC2H1Q8NCM8 4307 aaKnown RBP13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 TRAV25A0A0B4J276 109 aa13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 APOA1P02647 267 aa13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 WT1-ASQ06250 92 aa13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 UBAC2Q8NBM4 344 aa13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 OR1L6Q8NGR2 347 aa13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 BSCL2Q96G97 398 aaPredicted RBP13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 SCPEP1Q9HB40 452 aa13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 NDUFA4L2Q9NRX3 87 aa13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 C21orf62Q9NYP8 219 aa13.17□□□□□ -0.3
SLC9A3R1-203ENST00000578958 IGHV3-21A0A0B4J1V1 117 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 LCE6AA0A183 80 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 VBP1P61758 197 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 NCS1P62166 190 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 Q56UQ5 140 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 LAMTOR1Q6IAA8 161 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 SPSB3Q6PJ21 355 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 LYSMD2Q8IV50 215 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 OR5B3Q8NH48 314 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 OR4A16Q8NH70 328 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 GPX8Q8TED1 209 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 CMTM3Q96MX0 182 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 C20orf24Q9BUV8 137 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 FUNDC2Q9BWH2 189 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 GGTLC1Q9BX51 225 aa13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 GAR1Q9NY12 217 aaKnown RBP13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 F11RQ9Y624 299 aaKnown RBP13.16□□□□□ -0.3
SLC9A3R1-203ENST00000578958 LOC102724200A0A096LPH7 203 aaPredicted RBP13.15□□□□□ -0.3
SLC9A3R1-203ENST00000578958 FAM25AB3EWG3 89 aa13.15□□□□□ -0.3
SLC9A3R1-203ENST00000578958 FAM25CB3EWG5 89 aa13.15□□□□□ -0.3
SLC9A3R1-203ENST00000578958 FAM25GB3EWG6 89 aa13.15□□□□□ -0.3
SLC9A3R1-203ENST00000578958 RCVRNP35243 200 aa13.15□□□□□ -0.3
SLC9A3R1-203ENST00000578958 RORCP51449 518 aa13.15□□□□□ -0.3
SLC9A3R1-203ENST00000578958 MZT2AQ6P582 158 aa13.15□□□□□ -0.3
SLC9A3R1-203ENST00000578958 H2BFWTQ7Z2G1 175 aa13.15□□□□□ -0.3
SLC9A3R1-203ENST00000578958 TBC1D26Q86UD7 250 aa13.15□□□□□ -0.3
SLC9A3R1-203ENST00000578958 CADM3Q8N126 398 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms