RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 Q8N6K4 173 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 RBM14Q96PK6 669 aaKnown RBP11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 SRSF8Q9BRL6 282 aaKnown RBP11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 RNF126Q9BV68 326 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 HINT2Q9BX68 163 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 FBXL15Q9H469 300 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 ZNF430Q9H8G1 570 aaPredicted RBP11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 HEYLQ9NQ87 328 aaPredicted RBP11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 PSENENQ9NZ42 101 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 TNFSF18Q9UNG2 199 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 TCF19Q9Y242 345 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 TRAV3A0A0B4J244 114 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 G3V3Q6 166 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 H3BUX3 64 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 FGF16O43320 207 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 HOXA3O43365 443 aaPredicted RBP11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 TSPAN9O75954 239 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 CD24P25063 80 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 RPL27AP46776 148 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 CAV2P51636 162 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 TNXAQ16473 311 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 OR2C3Q8N628 320 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 SSMEM1Q8WWF3 244 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 RITA1Q96K30 269 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 SLC25A33Q9BSK2 321 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 PRDM13Q9H4Q3 707 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 LYRM2Q9NU23 88 aaPredicted RBP11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 OR5AC2Q9NZP5 309 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 STRAPQ9Y3F4 350 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 U3KQ87 197 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 PLXNB1O43157 2135 aa11.11□□□□□ -0.63
CSNK1D-209ENST00000578904 TEX50A0A1B0GTY4 177 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 KANTRA0A1W2PQU2 76 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 DNAJC9-AS1A6NH13 148 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 H0YIZ8 118 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 TCF21O43680 179 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 IGHV4-59P01825 116 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 CNTFRP26992 372 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 RPL12P30050 165 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 SNCAP37840 140 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 COMPP49747 757 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 AP2S1P53680 142 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 HILS1P60008 231 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 RAB11AP62491 216 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 BAXQ07812 192 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 OR11H4Q8NGC9 324 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 AQP10Q96PS8 301 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 JMJD8Q96S16 334 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 TNFRSF19Q9NS68 423 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 HSPB11Q9Y547 144 aa11.1□□□□□ -0.63
CSNK1D-209ENST00000578904 INS-IGF2F8WCM5 200 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 TAAR5O14804 337 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 CYB5BO43169 146 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 IFNA10P01566 189 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 IAPPP10997 89 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 HTR2BP41595 481 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 IER3P46695 156 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 GNB1P62873 340 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 EIF5AP63241 154 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 HBG1P69891 147 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 HBG2P69892 147 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 SPANXN5Q5MJ07 72 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 ZNF562Q6V9R5 426 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 TMEM86BQ8N661 226 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 GRPEL2Q8TAA5 225 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 DUX5Q96PT3 197 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 NDUFA4L2Q9NRX3 87 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 MXRA5Q9NR99 2828 aa11.09□□□□□ -0.63
CSNK1D-209ENST00000578904 A6NDX4 124 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 CA2P00918 260 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 HLA-DRB1P01911 266 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 S100A11P31949 105 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 NKX2-5P52952 324 aaPredicted RBP11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 FXYD3Q14802 87 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 LY6EQ16553 131 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 KCNRGQ8N5I3 272 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 Q8N9W7 124 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 ARL6Q9H0F7 186 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 ESM1Q9NQ30 184 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 PLSCR3Q9NRY6 295 aa11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 PAIP2BQ9ULR5 123 aaKnown RBP11.08□□□□□ -0.64
CSNK1D-209ENST00000578904 KCNAB3O43448 404 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 OPN1MWP04001 364 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 OR8U8P0C7N1 319 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 OPN1MW2P0DN77 364 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 OPN1MW3P0DN78 364 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 HKR1P10072 659 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 SULT1A1P50225 295 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 LGALSLQ3ZCW2 172 aaPredicted RBP11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 TMUB2Q71RG4 321 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 C9orf62Q8N4C0 152 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 TMEM252Q8N6L7 170 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 OR1L6Q8NGR2 347 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 ABHD5Q8WTS1 349 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 SRSF12Q8WXF0 261 aaKnown RBP11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 PINX1Q96BK5 328 aaKnown RBP11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 TMEM68Q96MH6 324 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms