RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ZNF345Q14585 488 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 ZNF562Q6V9R5 426 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 HSD17B13Q7Z5P4 300 aaPredicted RBP10.69□□□□□ -0.7
SRSF1-202ENST00000578430 OR2C3Q8N628 320 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 Q8N9W7 124 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 SSMEM1Q8WWF3 244 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 AQP10Q96PS8 301 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 RASL11BQ9BPW5 248 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 SLC25A33Q9BSK2 321 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 MFFQ9GZY8 342 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 SLC25A31Q9H0C2 315 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 PLEKHA3Q9HB20 300 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 TPSG1Q9NRR2 321 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 LYRM2Q9NU23 88 aaPredicted RBP10.69□□□□□ -0.7
SRSF1-202ENST00000578430 SOX21Q9Y651 276 aaPredicted RBP10.69□□□□□ -0.7
SRSF1-202ENST00000578430 ARPC5O15511 151 aa10.68□□□□□ -0.7
SRSF1-202ENST00000578430 HLA-DRB1P01911 266 aa10.68□□□□□ -0.7
SRSF1-202ENST00000578430 RPL12P30050 165 aaKnown RBP10.68□□□□□ -0.7
SRSF1-202ENST00000578430 VDAC2P45880 294 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-202ENST00000578430 HOXA1P49639 335 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-202ENST00000578430 PAX9P55771 341 aa10.68□□□□□ -0.7
SRSF1-202ENST00000578430 PJVKQ0ZLH3 352 aa10.68□□□□□ -0.7
SRSF1-202ENST00000578430 TNXAQ16473 311 aa10.68□□□□□ -0.7
SRSF1-202ENST00000578430 TMEM86BQ8N661 226 aa10.68□□□□□ -0.7
SRSF1-202ENST00000578430 HEYLQ9NQ87 328 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-202ENST00000578430 PSENENQ9NZ42 101 aa10.68□□□□□ -0.7
SRSF1-202ENST00000578430 CDC42EP3Q9UKI2 254 aa10.68□□□□□ -0.7
SRSF1-202ENST00000578430 U3KQ87 197 aa10.68□□□□□ -0.7
SRSF1-202ENST00000578430 CNIH1O95406 144 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 TMEM50AO95807 157 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 LY6G6DO95868 133 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 CA2P00918 260 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 IAPPP10997 89 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 ERHP84090 104 aaKnown RBP10.67□□□□□ -0.7
SRSF1-202ENST00000578430 BAXQ07812 192 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 FBLN7Q53RD9 439 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 C9orf62Q8N4C0 152 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 KCNRGQ8N5I3 272 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 C5orf56Q8N8D9 126 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 GRPEL2Q8TAA5 225 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 C22orf15Q8WYQ4 148 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 HINT2Q9BX68 163 aa10.67□□□□□ -0.7
SRSF1-202ENST00000578430 STRAPQ9Y3F4 350 aaKnown RBP10.67□□□□□ -0.7
SRSF1-202ENST00000578430 MDFIC2A0A1B0GVS7 189 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 RNF222A6NCQ9 220 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 FCN1O00602 326 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 HKR1P10072 659 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 HTR2BP41595 481 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 CAV2P51636 162 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 NKX2-5P52952 324 aaPredicted RBP10.66□□□□□ -0.7
SRSF1-202ENST00000578430 FXYD3Q14802 87 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 LGALSLQ3ZCW2 172 aaPredicted RBP10.66□□□□□ -0.7
SRSF1-202ENST00000578430 CLEC9AQ6UXN8 241 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 RBMS3Q6XE24 437 aaKnown RBP10.66□□□□□ -0.7
SRSF1-202ENST00000578430 STX12Q86Y82 276 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 TMEM252Q8N6L7 170 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 SRSF12Q8WXF0 261 aaKnown RBP10.66□□□□□ -0.7
SRSF1-202ENST00000578430 ZNF48Q96MX3 618 aaPredicted RBP10.66□□□□□ -0.7
SRSF1-202ENST00000578430 ZC4H2Q9NQZ6 224 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 VPREB3Q9UKI3 123 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 TNCP24821 2201 aa10.66□□□□□ -0.7
SRSF1-202ENST00000578430 CGB1A6NKQ9 187 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 TAAR5O14804 337 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 IGHV4-59P01825 116 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 MYOD1P15172 320 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 CXCL2P19875 107 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 S100A11P31949 105 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 SUB1P53999 127 aaKnown RBP eCLIP10.65□□□□□ -0.7
SRSF1-202ENST00000578430 RAB11AP62491 216 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 GNB1P62873 340 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 CX3CL1P78423 397 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 SSBP2P81877 361 aaPredicted RBP10.65□□□□□ -0.7
SRSF1-202ENST00000578430 SPANXN5Q5MJ07 72 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 C10orf55Q5SWW7 151 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 LAMTOR1Q6IAA8 161 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 TMEM14EPQ6UXP3 125 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 IL17RELQ6ZVW7 336 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 Q71RC1 249 aaPredicted RBP10.65□□□□□ -0.7
SRSF1-202ENST00000578430 TMEM219Q86XT9 240 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 ARPC1AQ92747 370 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 HSPB11Q9Y547 144 aa10.65□□□□□ -0.7
SRSF1-202ENST00000578430 TET2Q6N021 2002 aaPredicted RBP10.64□□□□□ -0.71
SRSF1-202ENST00000578430 IGHV7-81A0A0B4J1V7 117 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 IGSF23A1L1A6 192 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 FAM24AA6NFZ4 105 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 MSGN1A6NI15 193 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 TSPAN9O75954 239 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 IFNA10P01566 189 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 OPN1MWP04001 364 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 OPN1MW2P0DN77 364 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 OPN1MW3P0DN78 364 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 SNCAP37840 140 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 SULT1A1P50225 295 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 HBG1P69891 147 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 HBG2P69892 147 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
SRSF1-202ENST00000578430 LY6EQ16553 131 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 BSXQ3C1V8 233 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 SPINK9Q5DT21 86 aa10.64□□□□□ -0.71
SRSF1-202ENST00000578430 TMUB2Q71RG4 321 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms