RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CMC4P56277 68 aaPredicted RBP8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 VAMP2P63027 116 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 MED22Q15528 200 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 C15orf32Q32M92 178 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 DEFB125Q8N687 156 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 CLUHP3Q96NS8 147 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 MRPL27Q9P0M9 148 aaKnown RBP8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 CD7P09564 240 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 CBLN1P23435 193 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 RPL27AP46776 148 aaKnown RBP8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 PPP5CP53041 499 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 INSL4Q14641 139 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 SMCO1Q147U7 214 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 GUCA2BQ16661 112 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 LBHQ53QV2 105 aaPredicted RBP8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 ZBTB34Q8NCN2 500 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 OR2A7Q96R45 310 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 OVOL2Q9BRP0 275 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 RETNQ9HD89 108 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 ADAM30Q9UKF2 790 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 KCNK7Q9Y2U2 307 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 UFC1Q9Y3C8 167 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 AK6Q9Y3D8 172 aaKnown RBP8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 PUS1Q9Y606 427 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 TENM2Q9NT68 2774 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 TEX22C9J3V5 150 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 KBTBD11O94819 623 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 HRASP01112 189 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 MYOD1P15172 320 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 ARL3P36405 182 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 CDKN1BP46527 198 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 HSD17B13Q7Z5P4 300 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 OR52B4Q8NGK2 314 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 SPAG8Q99932 426 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 CCDC90BQ9GZT6 254 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 DUSP21Q9H596 190 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 SEPSECSQ9HD40 501 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 GAR1Q9NY12 217 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 FBXL7Q9UJT9 491 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 OR2W1Q9Y3N9 320 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 RAB27BO00194 218 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 RBMXL2O75526 392 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 CLEC2LP0C7M8 214 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 LINC00205P59089 165 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 LIPKQ5VXJ0 399 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 CNIH2Q6PI25 160 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 KCTD9Q7L273 389 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 RNASE11Q8TAA1 199 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 BET1LQ9NYM9 111 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 THYN1Q9P016 225 aa8.42□□□□□ -1.06
SMARCE1-214ENST00000578112 LINC00473A8K010 186 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 RBFOX2O43251 390 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 TCTAP57738 103 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 TRIM16LQ309B1 348 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 CEMP1Q6PRD7 247 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 SSX9Q7RTT3 188 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 OR2C3Q8N628 320 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 ZNF436Q9C0F3 470 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 OR51M1Q9H341 326 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 C5orf66Q9H5L9 145 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 TMEM213A2RRL7 107 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 RGS10O43665 173 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 OR2J3O76001 311 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 GPX4P36969 197 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 RPS25P62851 125 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 EIF4EBP1Q13541 118 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 OXA1LQ15070 435 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 POU2AF1Q16633 256 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 PRSS48Q7RTY5 328 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 VN1R17PQ8TDU5 208 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 STARD9Q9P2P6 4700 aa8.41□□□□□ -1.06
SMARCE1-214ENST00000578112 IFITM5A6NNB3 132 aa8.4□□□□□ -1.06
SMARCE1-214ENST00000578112 FCGR3BO75015 233 aa8.4□□□□□ -1.06
SMARCE1-214ENST00000578112 MYL9P24844 172 aa8.4□□□□□ -1.06
SMARCE1-214ENST00000578112 ZNF367Q7RTV3 350 aa8.4□□□□□ -1.06
SMARCE1-214ENST00000578112 OR1L6Q8NGR2 347 aa8.4□□□□□ -1.06
SMARCE1-214ENST00000578112 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
SMARCE1-214ENST00000578112 DCUN1D5Q9BTE7 237 aa8.4□□□□□ -1.06
SMARCE1-214ENST00000578112 ST6GALNAC5Q9BVH7 336 aa8.4□□□□□ -1.06
SMARCE1-214ENST00000578112 RPH3ALQ9UNE2 315 aa8.4□□□□□ -1.06
SMARCE1-214ENST00000578112 IGLV11-55A0A075B6I3 123 aa8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 A0A0B4J293 547 aa8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 A0A1B0GV90 55 aa8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 SPRY2O43597 315 aa8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 MRPS14O60783 128 aaKnown RBP8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 SNRPBP14678 240 aaKnown RBP8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 SCAND1P57086 179 aa8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 LAMTOR1Q6IAA8 161 aa8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 TMEM61Q8N0U2 210 aa8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 ST8SIA2Q92186 375 aa8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 WDR89Q96FK6 387 aaPredicted RBP8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 CCDC140Q96MF4 163 aa8.4□□□□□ -1.07
SMARCE1-214ENST00000578112 OR2C1O95371 312 aa8.39□□□□□ -1.07
SMARCE1-214ENST00000578112 SMIM6P0DI80 62 aa8.39□□□□□ -1.07
SMARCE1-214ENST00000578112 ALDH3B2P48448 385 aa8.39□□□□□ -1.07
SMARCE1-214ENST00000578112 TBCEQ15813 527 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1-214ENST00000578112 ANAPC16Q96DE5 110 aa8.39□□□□□ -1.07
SMARCE1-214ENST00000578112 TRDV1A0A1B0GX56 115 aa8.39□□□□□ -1.07
SMARCE1-214ENST00000578112 PPP5D1E7EU14 171 aa8.39□□□□□ -1.07
SMARCE1-214ENST00000578112 PTGES3LE9PB15 166 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms