RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 AMY1AP04745 511 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 PLA2G2AP14555 144 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 FGF9P31371 208 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 GPX4P36969 197 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SPCS2Q15005 226 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 ELOBQ15370 118 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 FCN2Q15485 313 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TWIST1Q15672 202 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TPTE2P1Q5T6R2 138 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 DMKNQ6E0U4 476 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 HOGA1Q86XE5 327 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 OR5AN1Q8NGI8 311 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 PPP1R1CQ8WVI7 109 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 NEUROG1Q92886 237 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SLX1AQ9BQ83 275 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 NAT8BQ9UHF3 227 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 DSPPQ9NZW4 1301 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 IGHV2-26A0A0B4J1V2 119 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 TCRBV5S2A0A599 114 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 PCP4L1A6NKN8 68 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 A8MWL6 223 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 M0R3E3 92 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF737O75373 536 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 NDUFB6O95139 128 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 NDUFB8O95169 186 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 NUDT3O95989 172 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 CA2P00918 260 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 GHRHP01286 108 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 AMBPP02760 352 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 PRSS53Q2L4Q9 553 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 MST1LQ2TV78 715 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 PSMG4Q5JS54 123 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF429Q86V71 674 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF843Q8N446 348 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 GVQW1Q8N7I0 195 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 NECAP1Q8NC96 275 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 NUDT10Q8NFP7 164 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 NABP1Q96AH0 204 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 C19orf24Q9BVV8 132 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 SRD5A3Q9H8P0 318 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 MANBALQ9NQG1 85 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 PEF1Q9UBV8 284 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF257Q9Y2Q1 563 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 LRRC37AA6NMS7 1700 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 MUC3AQ02505 3323 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 A0A1W2PPQ1 181 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 C12orf77C9JDV5 145 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 NPIPB9F8W1W9 429 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 ADAM10O14672 748 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 KLF4O43474 513 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 NPIPB7O75200 414 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 CSN3P07498 182 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 TGFBR1P36897 503 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 PRCDQ00LT1 54 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 PRB3Q04118 309 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 KLRD1Q13241 179 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 TMEM187Q14656 261 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 DAZAP2Q15038 168 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 RPL39P5Q59GN2 51 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 LYRM7Q5U5X0 104 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 WDR82Q6UXN9 313 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF841Q6ZN19 808 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 C1orf122Q6ZSJ8 110 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 FGFRL1Q8N441 504 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 KIR3DL3Q8N743 410 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 KLHDC1Q8N7A1 406 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 FAM216AQ8WUB2 273 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 OR51M1Q9H341 326 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 TSC2P49815 1807 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 A0A0A6YYJ9 748 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 FAM90A26D6RGX4 464 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 MBPP02686 304 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 PGA5P0DJD9 388 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 SMIM18P0DKX4 95 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 IGHV1-8P0DP01 117 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 UCP3P55916 312 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 CACNG7P62955 275 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 SCN5AQ14524 2016 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 TMEM241Q24JQ0 296 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 TMEM97Q5BJF2 176 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 IGSF11Q5DX21 431 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 FAM120AOSQ5T036 256 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 HEPN1Q6WQI6 88 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 TMUB2Q71RG4 321 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 LRP11Q86VZ4 500 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 LDLRAD3Q86YD5 345 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 OR11H4Q8NGC9 324 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 OR4D11Q8NGI4 311 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 OR5H6Q8NGV6 325 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 SLC25A38Q96DW6 304 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 TRAF4Q9BUZ4 470 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 PKIGQ9Y2B9 76 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 PARP14Q460N5 1801 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 WNK1Q9H4A3 2382 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 IGHV3OR16-8A0A075B7F1 116 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 IGHV2-70DA0A0C4DH43 119 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 SRRM5B3KS81 715 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 C4orf51C9J302 202 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 SPINK4O60575 86 aa2.44□□□□□ -2.02
SMCHD1-203ENST00000577880 ELANEP08246 267 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms