RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 K7EMT4 169 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 SULT1C2O00338 296 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 IFNA4P05014 189 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 FGF9P31371 208 aaPredicted RBP10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 CBX5P45973 191 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 HERV-K104P61576 105 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 RELQ04864 619 aaPredicted RBP10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 SLC25A24Q6NUK1 477 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 TSPAN14Q8NG11 270 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 OR1L8Q8NGR8 309 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 GATAD1Q8WUU5 269 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 FCGR1BQ92637 280 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 CMTM3Q96MX0 182 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 C20orf24Q9BUV8 137 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 C21orf62Q9NYP8 219 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 SSR3Q9UNL2 185 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 RRP15Q9Y3B9 282 aaKnown RBP10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 ETV7Q9Y603 341 aa10.56□□□□□ -0.72
SMARCD2-205ENST00000577686 OR2T8A6NH00 312 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 SSX5O60225 188 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 SNAPC5O75971 98 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 OR13C7P0DN81 318 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 FXYD4P59646 89 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 GABARAPL2P60520 117 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 SFXN4Q6P4A7 337 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 HOGA1Q86XE5 327 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 LGALS14Q8TCE9 139 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 LSM10Q969L4 123 aaKnown RBP10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 CNBD2Q96M20 576 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 DIABLOQ9NR28 239 aa10.55□□□□□ -0.72
SMARCD2-205ENST00000577686 TRAV18A0A075B6X5 111 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 SMIM30A4D0T7 59 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 C15orf62A8K5M9 175 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 CD5P06127 495 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 EIF4EP06730 217 aaKnown RBP10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 SERPINE2P07093 398 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 PSMB9P28065 219 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 BRWD1-AS2P59051 145 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 Q56UQ5 140 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 LGALS9CQ6DKI2 356 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 TMEM17Q86X19 198 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 OR51H1Q8NH63 302 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 PHLDA1Q8WV24 401 aaPredicted RBP10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 TMEM56Q96MV1 263 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 HINT2Q9BX68 163 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 TXNL4BQ9NX01 149 aaKnown RBP10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 FKBP11Q9NYL4 201 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 F11RQ9Y624 299 aaKnown RBP10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 ALMS1Q8TCU4 4167 aa10.54□□□□□ -0.72
SMARCD2-205ENST00000577686 CGB1A6NKQ9 187 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 MPTX1A8MV57 137 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 NUPL2O15504 423 aaKnown RBP10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 RPA2P15927 270 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 S100GP29377 79 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 TCTAP57738 103 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 PAFAH1B2P68402 229 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 ODF3L2Q3SX64 289 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 IZUMO2Q6UXV1 221 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 NR2C2APQ86WQ0 139 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 CMTM1Q8IZ96 169 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 UBAC2Q8NBM4 344 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 GIMAP1Q8WWP7 306 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 GPHA2Q96T91 129 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 TSC22D3Q99576 134 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 MAP6D1Q9H9H5 199 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 IFT46Q9NQC8 304 aa10.53□□□□□ -0.72
SMARCD2-205ENST00000577686 MARCH11A6NNE9 402 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 TMEM127O75204 238 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 S1PR2O95136 353 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 CTSDP07339 412 aaPredicted RBP10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 UBE2UQ5VVX9 321 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 CENPSQ8N2Z9 138 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 OR5AP2Q8NGF4 316 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 OR10W1Q8NGF6 305 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 OR5B3Q8NH48 314 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 NRG4Q8WWG1 115 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 CSTL1Q9H114 145 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 PRNDQ9UKY0 176 aa10.52□□□□□ -0.73
SMARCD2-205ENST00000577686 TEX50A0A1B0GTY4 177 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 F2RP25116 425 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 ADMP35318 185 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 RBMS2Q15434 407 aaKnown RBP10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 ZNF818PQ6ZRF7 136 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 CADM3Q8N126 398 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 GVQW1Q8N7I0 195 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 C11orf45Q8TAV5 145 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 RARRES2Q99969 163 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 GINS3Q9BRX5 216 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 SMPXQ9UHP9 88 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 RAB26Q9ULW5 256 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 OR51B2Q9Y5P1 312 aa10.51□□□□□ -0.73
SMARCD2-205ENST00000577686 TRAV3A0A0B4J244 114 aa10.5□□□□□ -0.73
SMARCD2-205ENST00000577686 YIF1AO95070 293 aa10.5□□□□□ -0.73
SMARCD2-205ENST00000577686 EWSR1Q01844 656 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMARCD2-205ENST00000577686 WT1-ASQ06250 92 aa10.5□□□□□ -0.73
SMARCD2-205ENST00000577686 IDNKQ5T6J7 187 aa10.5□□□□□ -0.73
SMARCD2-205ENST00000577686 TMEM116Q8NCL8 245 aa10.5□□□□□ -0.73
SMARCD2-205ENST00000577686 SCARB1Q8WTV0 552 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms