RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 TAAR5O14804 337 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 ARPC5O15511 151 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 CNIH1O95406 144 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 CA2P00918 260 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 RPL12P30050 165 aaKnown RBP12.14□□□□□ -0.47
SS18-206ENST00000577572 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.47
SS18-206ENST00000577572 PJVKQ0ZLH3 352 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 TNXAQ16473 311 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 CLEC9AQ6UXN8 241 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 STX12Q86Y82 276 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 STPG2Q8N412 459 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 C9orf62Q8N4C0 152 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 KCNRGQ8N5I3 272 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 OR1L6Q8NGR2 347 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 ZNF580Q9UK33 172 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 STRAPQ9Y3F4 350 aaKnown RBP12.14□□□□□ -0.47
SS18-206ENST00000577572 ZANQ9Y493 2812 aa12.14□□□□□ -0.47
SS18-206ENST00000577572 OTOGQ6ZRI0 2925 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 RNF222A6NCQ9 220 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 CLDN34H7C241 214 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 FCN1O00602 326 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 KCNAB3O43448 404 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 TMEM50AO95807 157 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 HKR1P10072 659 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 CAV2P51636 162 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 CX3CL1P78423 397 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 FXYD3Q14802 87 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 BSXQ3C1V8 233 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 TMEM14EPQ6UXP3 125 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 ZNF114Q8NC26 417 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 SRSF12Q8WXF0 261 aaKnown RBP12.13□□□□□ -0.47
SS18-206ENST00000577572 ZNF48Q96MX3 618 aaPredicted RBP12.13□□□□□ -0.47
SS18-206ENST00000577572 SOX21Q9Y651 276 aaPredicted RBP12.13□□□□□ -0.47
SS18-206ENST00000577572 TEX15Q9BXT5 2789 aa12.13□□□□□ -0.47
SS18-206ENST00000577572 NXPH3O95157 252 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 IGHV4-59P01825 116 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 IAPPP10997 89 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 S100A11P31949 105 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 SNCAP37840 140 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 SULT1A1P50225 295 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 RPL15P61313 204 aaKnown RBP12.12□□□□□ -0.47
SS18-206ENST00000577572 RAB11AP62491 216 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 HBG1P69891 147 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 HBG2P69892 147 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 SSBP2P81877 361 aaPredicted RBP12.12□□□□□ -0.47
SS18-206ENST00000577572 LGALSLQ3ZCW2 172 aaPredicted RBP12.12□□□□□ -0.47
SS18-206ENST00000577572 FBLN7Q53RD9 439 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 SLC24A4Q8NFF2 622 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 ARPC1AQ92747 370 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 GGACTQ9BVM4 153 aa12.12□□□□□ -0.47
SS18-206ENST00000577572 IGHV7-81A0A0B4J1V7 117 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 MDFIC2A0A1B0GVS7 189 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 IGLC7A0M8Q6 106 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 CGB1A6NKQ9 187 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 CYB5BO43169 146 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 SRD5A1P18405 259 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 CRIP2P52943 208 aaPredicted RBP12.11□□□□□ -0.47
SS18-206ENST00000577572 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.47
SS18-206ENST00000577572 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 LAMTOR1Q6IAA8 161 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 C22orf15Q8WYQ4 148 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 PINX1Q96BK5 328 aaKnown RBP12.11□□□□□ -0.47
SS18-206ENST00000577572 RBMXL1Q96E39 390 aaKnown RBP12.11□□□□□ -0.47
SS18-206ENST00000577572 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 ZC4H2Q9NQZ6 224 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
SS18-206ENST00000577572 MSGN1A6NI15 193 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 TEX22C9J3V5 150 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 CORTO00230 105 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 IFNA10P01566 189 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 IGHG2P01859 326 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 AMY1AP04745 511 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 CRYGCP07315 174 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 CXCL2P19875 107 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 NPY1RP25929 384 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 AP2S1P53680 142 aaPredicted RBP12.1□□□□□ -0.47
SS18-206ENST00000577572 GNB1P62873 340 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 TMEM267Q0VDI3 215 aaPredicted RBP12.1□□□□□ -0.47
SS18-206ENST00000577572 ATP6V1FQ16864 119 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 TMEM219Q86XT9 240 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 SIGLECL1Q8N7X8 197 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 SGMS2Q8NHU3 365 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 GRPEL2Q8TAA5 225 aa12.1□□□□□ -0.47
SS18-206ENST00000577572 RNASEH2CQ8TDP1 164 aaKnown RBP12.1□□□□□ -0.47
SS18-206ENST00000577572 ZNF469Q96JG9 3925 aaPredicted RBP12.09□□□□□ -0.47
SS18-206ENST00000577572 KANTRA0A1W2PQU2 76 aa12.09□□□□□ -0.47
SS18-206ENST00000577572 IGSF23A1L1A6 192 aa12.09□□□□□ -0.47
SS18-206ENST00000577572 FAM24AA6NFZ4 105 aa12.09□□□□□ -0.47
SS18-206ENST00000577572 C15orf62A8K5M9 175 aa12.09□□□□□ -0.47
SS18-206ENST00000577572 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
SS18-206ENST00000577572 FNDC10F2Z333 226 aa12.09□□□□□ -0.47
SS18-206ENST00000577572 HOXA3O43365 443 aaPredicted RBP12.09□□□□□ -0.47
SS18-206ENST00000577572 DFFBO76075 338 aa12.09□□□□□ -0.47
SS18-206ENST00000577572 OPN1MWP04001 364 aa12.09□□□□□ -0.47
SS18-206ENST00000577572 IGF1P05019 195 aa12.09□□□□□ -0.47
SS18-206ENST00000577572 OPN1MW2P0DN77 364 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 314.8 ms