RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ACOT12Q8WYK0 555 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 PHB2Q99623 299 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 SEPSECSQ9HD40 501 aaKnown RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 TREM1Q9NP99 234 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 ACOT13Q9NPJ3 140 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 PEF1Q9UBV8 284 aaKnown RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 RBM7Q9Y580 266 aaKnown RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 SORL1Q92673 2214 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 A0A0G2JLM5 398 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 LCE6AA0A183 80 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 IFITM5A6NNB3 132 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 A8MZ25 164 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 PPP5D1E7EU14 171 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 BMPR1BO00238 502 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 IGHV3-23P01764 117 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 HLA-AP01891 365 aaKnown RBP4.7□□□□□ -1.66
NUP88-212ENST00000576708 CRYGCP07315 174 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 OR9G9P0C7N8 305 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 MYOD1P15172 320 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 HIST1H1DP16402 221 aaKnown RBP4.7□□□□□ -1.66
NUP88-212ENST00000576708 AADACP22760 399 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 NFYAP23511 347 aaPredicted RBP4.7□□□□□ -1.66
NUP88-212ENST00000576708 GADD45AP24522 165 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 PSMA1P25786 263 aaKnown RBP4.7□□□□□ -1.66
NUP88-212ENST00000576708 UBE2KP61086 200 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 RHOGP84095 191 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 EXOSC2Q13868 293 aaKnown RBP4.7□□□□□ -1.66
NUP88-212ENST00000576708 GAMTQ14353 236 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 RTL8BQ17RB0 113 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 RPEL1Q2QD12 228 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 C22orf42Q6IC83 251 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 ZNF66Q6ZN08 573 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 PRSS48Q7RTY5 328 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 VKORC1L1Q8N0U8 176 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 TEX45Q8NA69 505 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 SRSF12Q8WXF0 261 aaKnown RBP4.7□□□□□ -1.66
NUP88-212ENST00000576708 CNBD2Q96M20 576 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 FYTTD1Q96QD9 318 aaKnown RBP4.7□□□□□ -1.66
NUP88-212ENST00000576708 FAM110AQ9BQ89 295 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 GINS4Q9BRT9 223 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 ST6GALNAC5Q9BVH7 336 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 WFDC10AQ9H1F0 79 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 ATG5Q9H1Y0 275 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 TUBA4BQ9H853 241 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 ZNF430Q9H8G1 570 aaPredicted RBP4.7□□□□□ -1.66
NUP88-212ENST00000576708 PLEKHA3Q9HB20 300 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 S4R3C0 116 aa4.7□□□□□ -1.66
NUP88-212ENST00000576708 TRAV1-2A0A0B4J238 106 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 IGKV1D-13A0A0B4J2D9 117 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 E7EUB6 86 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 H0Y980 276 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 PDCD5O14737 125 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 FCGR3BO75015 233 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 OR2J3O76001 311 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 BRI3O95415 125 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 CD7P09564 240 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 SAA1P0DJI8 122 aaPredicted RBP4.69□□□□□ -1.66
NUP88-212ENST00000576708 IGKV1-13P0DP09 117 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 RRASP10301 218 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 PTHLHP12272 177 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 CTRB1P17538 263 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 RAB3BP20337 219 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 TALDO1P37837 337 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 BRWD1-AS2P59051 145 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 ATP5G2Q06055 141 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 SPCS2Q15005 226 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 VMA21Q3ZAQ7 101 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 CDNFQ49AH0 187 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 CTRB2Q6GPI1 263 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 IZUMO2Q6UXV1 221 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 ZNF367Q7RTV3 350 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 AKAP14Q86UN6 197 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 STX12Q86Y82 276 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 DEFB125Q8N687 156 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 NUDCD2Q8WVJ2 157 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 ISOC1Q96CN7 298 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 USMG5Q96IX5 58 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 LYSTQ99698 3801 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 DCUN1D5Q9BTE7 237 aa4.69□□□□□ -1.66
NUP88-212ENST00000576708 CSMD3Q7Z407 3707 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.68□□□□□ -1.66
NUP88-212ENST00000576708 TRBV9A0A0B4J1U6 114 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 A0A1B0GW64 132 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 TRDV1A0A1B0GX56 115 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 RBMY1BA6NDE4 496 aaKnown RBP4.68□□□□□ -1.66
NUP88-212ENST00000576708 RBMY1EA6NEQ0 496 aaKnown RBP4.68□□□□□ -1.66
NUP88-212ENST00000576708 TEX22C9J3V5 150 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 SSX5O60225 188 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 ACTL6BO94805 426 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 NDUFB8O95169 186 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 OR2C1O95371 312 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 HLA-DQB1P01920 261 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 FCER2P06734 321 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 RBMY1DP0C7P1 496 aaKnown RBP4.68□□□□□ -1.66
NUP88-212ENST00000576708 MYL9P24844 172 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 CD81P60033 236 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 CDK10Q15131 360 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 TATDN3Q17R31 274 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 LCN12Q6JVE5 192 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms