RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 STHQ8IWL8 128 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 GIMAP1Q8WWP7 306 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 TAS2R8Q9NYW2 309 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 CELA1Q9UNI1 258 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 CYB5BO43169 146 aa11.73□□□□□ -0.53
CTDNEP1-211ENST00000575783 Q56UQ5 140 aa11.73□□□□□ -0.53
CTDNEP1-211ENST00000575783 MFSD4AQ8N468 514 aa11.73□□□□□ -0.53
CTDNEP1-211ENST00000575783 OR10W1Q8NGF6 305 aa11.73□□□□□ -0.53
CTDNEP1-211ENST00000575783 FAM3DQ96BQ1 224 aa11.73□□□□□ -0.53
CTDNEP1-211ENST00000575783 GPHA2Q96T91 129 aa11.73□□□□□ -0.53
CTDNEP1-211ENST00000575783 HSD17B10Q99714 261 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-211ENST00000575783 C21orf62Q9NYP8 219 aa11.73□□□□□ -0.53
CTDNEP1-211ENST00000575783 OR2W1Q9Y3N9 320 aa11.73□□□□□ -0.53
CTDNEP1-211ENST00000575783 TRAV3A0A0B4J244 114 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 IGKV1D-13A0A0B4J2D9 117 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 DNASE2O00115 360 aaPredicted RBP11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 SLC22A5O76082 557 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 HLA-DQB1P01920 261 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 GIG44P09565 113 aaPredicted RBP11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 UCHL1P09936 223 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 IGKV1-13P0DP09 117 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 LIPKQ5VXJ0 399 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 ZFP1Q6P2D0 407 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 Q6ZRM9 215 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 NANOGP1Q8N7R0 232 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 SCARB1Q8WTV0 552 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 CENPOQ9BU64 300 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 COMMD5Q9GZQ3 224 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 BET1LQ9NYM9 111 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 X6R8D5 127 aa11.72□□□□□ -0.53
CTDNEP1-211ENST00000575783 OR13C7P0DN81 318 aa11.71□□□□□ -0.53
CTDNEP1-211ENST00000575783 TIMM50Q3ZCQ8 353 aa11.71□□□□□ -0.53
CTDNEP1-211ENST00000575783 FAM90A2PQ658T7 463 aa11.71□□□□□ -0.53
CTDNEP1-211ENST00000575783 TCF24Q7RTU0 167 aa11.71□□□□□ -0.53
CTDNEP1-211ENST00000575783 GDPD1Q8N9F7 314 aa11.71□□□□□ -0.53
CTDNEP1-211ENST00000575783 TMEM203Q969S6 136 aa11.71□□□□□ -0.53
CTDNEP1-211ENST00000575783 CLEC5AQ9NY25 188 aa11.71□□□□□ -0.53
CTDNEP1-211ENST00000575783 SMPD3Q9NY59 655 aaPredicted RBP11.71□□□□□ -0.53
CTDNEP1-211ENST00000575783 RAB22AQ9UL26 194 aa11.71□□□□□ -0.53
CTDNEP1-211ENST00000575783 TRAV14DV4A0A0A6YYC5 116 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 TMEM272A0A1B0GTI8 110 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 ZNF705EA8MWA4 302 aaPredicted RBP11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 F8W735 103 aaPredicted RBP11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 NUPL2O15504 423 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 GADD45AP24522 165 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 RPL11P62913 178 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 SSX1Q16384 188 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 AHSA2Q719I0 299 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 FAM24BQ8N5W8 94 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 OR10R2Q8NGX6 335 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 CYGBQ8WWM9 190 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 SRSF8Q9BRL6 282 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 QTRT1Q9BXR0 403 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 MS4A6AQ9H2W1 248 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 TBC1D24Q9ULP9 559 aa11.7□□□□□ -0.54
CTDNEP1-211ENST00000575783 MFNGO00587 321 aa11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 TNFSF12O43508 249 aa11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 DFFBO76075 338 aa11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 SERPINE2P07093 398 aa11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 CTSGP08311 255 aa11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 HIST1H1DP16402 221 aaKnown RBP11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 NPY1RP25929 384 aa11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 TNP2Q05952 138 aa11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 EIF4EBP1Q13541 118 aaPredicted RBP11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 Q6ZS49 121 aa11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 AIFM2Q9BRQ8 373 aa11.69□□□□□ -0.54
CTDNEP1-211ENST00000575783 UPK2O00526 184 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 ATP5HO75947 161 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 CD74P04233 296 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 C4BPBP20851 252 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 RELQ04864 619 aaPredicted RBP11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 WT1-ASQ06250 92 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 TMEM41BQ5BJD5 291 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 HES5Q5TA89 166 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 ZNF66Q6ZN08 573 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 ATP6V0BQ99437 205 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 PSORS1C1Q9UIG5 152 aa11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 ELF5Q9UKW6 265 aaPredicted RBP11.68□□□□□ -0.54
CTDNEP1-211ENST00000575783 IGHV3-66A0A0C4DH42 116 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 ST8SIA3O43173 380 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 CTXN2P0C2S0 81 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 MORN3Q6PF18 240 aaPredicted RBP11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 SPAG16Q8N0X2 631 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 DGCR14Q96DF8 476 aaKnown RBP11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 ZNF414Q96IQ9 312 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 OR10C1Q96KK4 312 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 HINT2Q9BX68 163 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 TMEM14BQ9NUH8 114 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 RABAC1Q9UI14 185 aa11.67□□□□□ -0.54
CTDNEP1-211ENST00000575783 DMBT1Q9UGM3 2413 aaPredicted RBP11.66□□□□□ -0.54
CTDNEP1-211ENST00000575783 KNCNA6PVL3 124 aa11.66□□□□□ -0.54
CTDNEP1-211ENST00000575783 K7EIM0 57 aa11.66□□□□□ -0.54
CTDNEP1-211ENST00000575783 EIF4EP06730 217 aaKnown RBP11.66□□□□□ -0.54
CTDNEP1-211ENST00000575783 SPP1P10451 314 aa11.66□□□□□ -0.54
CTDNEP1-211ENST00000575783 BPIFB6Q8NFQ5 453 aa11.66□□□□□ -0.54
CTDNEP1-211ENST00000575783 ST8SIA2Q92186 375 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms