RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 FAM90A18PA6NE21 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A16PA6NEW6 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A20PA6NIJ5 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A8PA6NJQ4 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A7PA6NKC0 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A22PA8MWA6 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A12PA8MX19 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A5PA8MXJ8 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A23PA8MXZ1 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A15PP0C7V4 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A13PP0C7W8 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A14PP0C7W9 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A24PP0C7X0 464 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 IGHV3-43DP0DP04 118 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FOXA3P55318 350 aaPredicted RBP8□□□□□ -1.13
CCDC40-212ENST00000574799 SPATA46Q5T0L3 261 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM108Q6UXF1 575 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 RAB37Q96AX2 223 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 GALMQ96C23 342 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 ZC2HC1AQ96GY0 325 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 GPR179Q6PRD1 2367 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 MRPL33O75394 65 aaKnown RBP8□□□□□ -1.13
CCDC40-212ENST00000574799 SAP30O75446 220 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 CGAP01215 116 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 CSN3P07498 182 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 COMPP49747 757 aaPredicted RBP8□□□□□ -1.13
CCDC40-212ENST00000574799 PLP1P60201 277 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 RPL8P62917 257 aaKnown RBP8□□□□□ -1.13
CCDC40-212ENST00000574799 PSG9Q00887 426 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 ZNF585BQ52M93 769 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 HSD17B10Q99714 261 aaKnown RBP8□□□□□ -1.13
CCDC40-212ENST00000574799 PMCHL2Q9BQD1 86 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 TP73-AS1Q9UF72 201 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 OR10J4P0C629 311 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 CTRLP40313 264 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 PCSK4Q6UW60 755 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 ASCL4Q6XD76 172 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 PPP1R32Q7Z5V6 425 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 BPIFA4PQ86YQ2 179 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 SPSB4Q96A44 273 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 SEPSECSQ9HD40 501 aaKnown RBP8□□□□□ -1.13
CCDC40-212ENST00000574799 A0A0J9YW62 118 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 FAM181BA6NEQ2 426 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 RHBDL1O75783 438 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 MMP23AO75900 390 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 LEPROTL1O95214 131 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 GOSR1O95249 250 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 HAND1O96004 215 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 NGFP01138 241 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 GRPP07492 148 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 CRYGSP22914 178 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 SELENOVP59797 346 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 SAMD13Q5VXD3 122 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM54Q969K7 222 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 SSBP4Q9BWG4 385 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-212ENST00000574799 PTPRBP23467 1997 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 A0A087X0K7 114 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 BMPR1BO00238 502 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 LAMTOR5O43504 91 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 FCGR3BO75015 233 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 CLDN14O95500 239 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 SP9P0CG40 484 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 GNG3P63215 75 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 YTHDF2Q9Y5A9 579 aaKnown RBP7.99□□□□□ -1.13
CCDC40-212ENST00000574799 C9orf172C9J069 976 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 CYC1P08574 325 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 DCAF12Q5T6F0 453 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 FAM216AQ8WUB2 273 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 MCRIP2Q9BUT9 160 aaKnown RBP7.99□□□□□ -1.13
CCDC40-212ENST00000574799 GNG12Q9UBI6 72 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 PSG11Q9UQ72 335 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 MED13Q9UHV7 2174 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 SVILO95425 2214 aa7.99□□□□□ -1.13
CCDC40-212ENST00000574799 C7orf71A4D174 169 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 PINLYPA6NC86 204 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 CORTO00230 105 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 IGHV3-13P01766 116 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 IGHV3-7P01780 117 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 ESDP10768 282 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 CD59P13987 128 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 CX3CL1P78423 397 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 MOB1BQ7L9L4 216 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 ZIC4Q8N9L1 334 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 DOCK7Q96N67 2140 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 TAAR6Q96RI8 345 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 ZNF355PQ9NSJ1 428 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 C17orf98A8MV24 154 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 PPOXP50336 477 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 CEACAM21Q3KPI0 293 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 ABHD12Q8N2K0 398 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 FGFBP3Q8TAT2 258 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 KCNE4Q8WWG9 221 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 HEATR1Q9H583 2144 aaKnown RBP7.98□□□□□ -1.13
CCDC40-212ENST00000574799 K7EN84 100 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 RRHO14718 337 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 RFPL3SP0C7P2 107 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 HTR1DP28221 377 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 ZNF137PP52743 207 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 SMIM21Q3B7S5 101 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 HES3Q5TGS1 186 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms