RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 IGFBP7Q16270 282 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 LBHQ53QV2 105 aaPredicted RBP3.84□□□□□ -1.79
CDC27-215ENST00000573550 DMRTC1Q5HYR2 192 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 SLC25A24Q6NUK1 477 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 Q6P435 159 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 ZNF645Q8N7E2 425 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 SUMF1Q8NBK3 374 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 OR1K1Q8NGR3 316 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 NANPQ8TBE9 248 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 RNASEH2CQ8TDP1 164 aaKnown RBP3.84□□□□□ -1.79
CDC27-215ENST00000573550 CA5BP1Q8WTZ4 195 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 FAM222BQ8WU58 562 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 RAB1CQ92928 201 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 GPR146Q96CH1 333 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 TMEM147Q9BVK8 224 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 PRRG4Q9BZD6 226 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 WDR61Q9GZS3 305 aaKnown RBP3.84□□□□□ -1.79
CDC27-215ENST00000573550 PARP12Q9H0J9 701 aaKnown RBP3.84□□□□□ -1.79
CDC27-215ENST00000573550 NIT2Q9NQR4 276 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 CCL28Q9NRJ3 127 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 KCNIP2Q9NS61 270 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 RPRMQ9NS64 109 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 KCNIP1Q9NZI2 227 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 MIOXQ9UGB7 285 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 NAT8Q9UHE5 227 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 PITPNC1Q9UKF7 332 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 DOCK10Q96BY6 2186 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 DNAH14Q0VDD8 3507 aa3.84□□□□□ -1.8
CDC27-215ENST00000573550 WDR87Q6ZQQ6 2873 aa3.84□□□□□ -1.8
CDC27-215ENST00000573550 TRIOO75962 3097 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 TRAV9-1A0A075B6T8 112 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 A0A0G2JRQ6 117 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 CTXND1A0A1B0GTU2 59 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 TMEM30CPA0ZSE6 113 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 PINLYPA6NC86 204 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 MAP1LC3B2A6NCE7 125 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 OR5H1A6NKK0 313 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 IQCF6A8MYZ5 107 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 LINC00587B1AMM8 73 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 G3V3Y1 287 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 CCL24O00175 119 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 SLC33A1O00400 549 aaPredicted RBP3.83□□□□□ -1.8
CDC27-215ENST00000573550 SH2D1BO14796 132 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 RBFOX2O43251 390 aaKnown RBP eCLIP3.83□□□□□ -1.8
CDC27-215ENST00000573550 SYNGR1O43759 233 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BKO60814 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 SMPD2O60906 423 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 TNFSF15O95150 251 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 IGKV1-39P01597 117 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 IGKV1-5P01602 117 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HLA-HP01893 362 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 IGKV1D-39P04432 117 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 ARG1P05089 322 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BJP06899 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 PSG2P11465 335 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 RPL35AP18077 110 aaKnown RBP3.83□□□□□ -1.8
CDC27-215ENST00000573550 OMGP23515 440 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BOP23527 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 OTX2P32243 289 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BBP33778 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 AKR1C3P42330 323 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 RPS10P46783 165 aaKnown RBP3.83□□□□□ -1.8
CDC27-215ENST00000573550 PSMB3P49720 205 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BDP58876 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BCP62807 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 CCL20P78556 96 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 RUNX1Q01196 453 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 PLGLB1Q02325 96 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 TGFBR3Q03167 851 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 RBPJQ06330 500 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 SLC38A11Q08AI6 406 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 EIF4EBP1Q13541 118 aaPredicted RBP3.83□□□□□ -1.8
CDC27-215ENST00000573550 HAGHQ16775 308 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST2H2BEQ16778 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 TBC1D28Q2M2D7 210 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.83□□□□□ -1.8
CDC27-215ENST00000573550 FBXW9Q5XUX1 488 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 WDR25Q64LD2 544 aaPredicted RBP3.83□□□□□ -1.8
CDC27-215ENST00000573550 SLC16A13Q7RTY0 426 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST3H2BBQ8N257 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 LINC00469Q8N7U9 141 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 MDS2Q8NDY4 140 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 OR51H1Q8NH63 302 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 RNASE11Q8TAA1 199 aaKnown RBP3.83□□□□□ -1.8
CDC27-215ENST00000573550 BCL2L2Q92843 193 aaPredicted RBP3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BHQ93079 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 ACY3Q96HD9 319 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 FAM210BQ96KR6 192 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 IMMP2LQ96T52 175 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HSD17B10Q99714 261 aaKnown RBP3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BNQ99877 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BMQ99879 126 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 RARRES2Q99969 163 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 C20orf24Q9BUV8 137 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 GGACTQ9BVM4 153 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 TTTY12Q9BZ98 90 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 MAP1LC3BQ9GZQ8 125 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 NCOR1P1Q9H4R4 102 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 SRD5A3Q9H8P0 318 aa3.83□□□□□ -1.8
CDC27-215ENST00000573550 PSENENQ9NZ42 101 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms