RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PJVKQ0ZLH3 352 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 CTRB2Q6GPI1 263 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 RBM14Q96PK6 669 aaKnown RBP8.31□□□□□ -1.08
SMG6-213ENST00000573166 GAR1Q9NY12 217 aaKnown RBP8.31□□□□□ -1.08
SMG6-213ENST00000573166 OR5AC2Q9NZP5 309 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 GAB2Q9UQC2 676 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 SLC31A2O15432 143 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 SAA1P0DJI8 122 aaPredicted RBP8.31□□□□□ -1.08
SMG6-213ENST00000573166 SLC25A4P12235 298 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 DLX1P56177 255 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 LOXL3P58215 753 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 HAGHQ16775 308 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 MIDNQ504T8 468 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 MINOS1Q5TGZ0 78 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 TEPPQ6URK8 271 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 JMJD8Q96S16 334 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 MBNL3Q9NUK0 354 aaKnown RBP8.31□□□□□ -1.08
SMG6-213ENST00000573166 TIMM9Q9Y5J7 89 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 MINOS1-NBL1R4GNA1 71 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 ABCA12Q86UK0 2595 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 HSBP1L1C9JCN9 74 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 RAMP3O60896 148 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 IGHV3-48P01763 117 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 SLC16A13Q7RTY0 426 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 DTX2Q86UW9 622 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 LDLRAD3Q86YD5 345 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 COMMD1Q8N668 190 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 FAM103A1Q9BTL3 118 aaKnown RBP8.3□□□□□ -1.08
SMG6-213ENST00000573166 POLQO75417 2590 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 MDFIC2A0A1B0GVS7 189 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 MPTX1A8MV57 137 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 RNASEK-C17orf49H0YIS7 233 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 H3BUX3 64 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 GATA3P23771 443 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 SAA4P35542 130 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 TPTE2P1Q5T6R2 138 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 PPP1R27Q86WC6 154 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 TMEM219Q86XT9 240 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 ARHGAP21Q5T5U3 1957 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 MSGN1A6NI15 193 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 TGOLN2O43493 480 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 CD1BP29016 333 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 COMPP49747 757 aaPredicted RBP8.3□□□□□ -1.08
SMG6-213ENST00000573166 RND2P52198 227 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 UBE2G2P60604 165 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 OR8I2Q8N0Y5 310 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 NPVFQ9HCQ7 196 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 KAAG1Q9UBP8 84 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 DOPEY1Q5JWR5 2465 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 TRAV14DV4A0A0A6YYC5 116 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 B2MP61769 119 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
SMG6-213ENST00000573166 RHOBP62745 196 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 SRSF3P84103 164 aaKnown RBP8.3□□□□□ -1.08
SMG6-213ENST00000573166 LRRC75BQ2VPJ9 315 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 OR4F17Q8NGA8 305 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 OR1L4Q8NGR5 311 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 OR4F5Q8NH21 305 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 OR4X1Q8NH49 305 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 CYYR1Q96J86 154 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 OR4F4Q96R69 305 aa8.3□□□□□ -1.08
SMG6-213ENST00000573166 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 TMEM218A2RU14 115 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 ZNF727A8MUV8 499 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 BUB1B-PAK6H3BSN5 160 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 DNASE2O00115 360 aaPredicted RBP8.29□□□□□ -1.08
SMG6-213ENST00000573166 RBFOX2O43251 390 aaKnown RBP eCLIP8.29□□□□□ -1.082e-6■■■■□ 23.3
SMG6-213ENST00000573166 DEDDO75618 318 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 IGHV2-70P01814 119 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 CR1LQ2VPA4 569 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 PDZD11Q5EBL8 140 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 SLC25A48Q6ZT89 311 aaKnown RBP8.29□□□□□ -1.08
SMG6-213ENST00000573166 LHFPL1Q86WI0 220 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 OR10G4Q8NGN3 311 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 OR10G9Q8NGN4 311 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 OR10G7Q8NGN6 311 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 ARPC1AQ92747 370 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 MED9Q9NWA0 146 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 DOCK11Q5JSL3 2073 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 IGHV2-70DA0A0C4DH43 119 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 M0QZK8 103 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 MMP9P14780 707 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 ARL3P36405 182 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 UBE2G1P62253 170 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 HERPUD1Q15011 391 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 CDSNQ15517 529 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 BBC3Q96PG8 261 aaPredicted RBP8.29□□□□□ -1.08
SMG6-213ENST00000573166 MMP26Q9NRE1 261 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 ZNRD1Q9P1U0 126 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 KIAA1549Q9HCM3 1950 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 IGHV3-35A0A0C4DH35 117 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 IGHV4-61A0A0C4DH41 118 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 OOSP1A8MZH6 123 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 CDC34P49427 236 aaPredicted RBP8.29□□□□□ -1.08
SMG6-213ENST00000573166 TPPP2P59282 170 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 RNF151Q2KHN1 245 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 FAM78BQ5VT40 261 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 BIVMQ86UB2 503 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 PRSS22Q9GZN4 317 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms