RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 ADAD2Q8NCV1 583 aaKnown RBP7.02□□□□□ -1.29
CIITA-208ENST00000572665 DYNLRB2Q8TF09 96 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 GFI1Q99684 422 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 KMT2CQ8NEZ4 4911 aaKnown RBP7.02□□□□□ -1.29
CIITA-208ENST00000572665 DNAH9Q9NYC9 4486 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 MFNGO00587 321 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 TNFAIP8O95379 198 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 CSN3P07498 182 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 LINC00205P59089 165 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 RHOGP84095 191 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 EXOSC2Q13868 293 aaKnown RBP7.01□□□□□ -1.29
CIITA-208ENST00000572665 HAGHQ16775 308 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 KCTD9Q7L273 389 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 HAPLN4Q86UW8 402 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 H1FOOQ8IZA3 346 aaPredicted RBP7.01□□□□□ -1.29
CIITA-208ENST00000572665 ZNF645Q8N7E2 425 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 NECAP1Q8NC96 275 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 OR4S2Q8NH73 311 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 FCGR1BQ92637 280 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 HSD17B10Q99714 261 aaKnown RBP7.01□□□□□ -1.29
CIITA-208ENST00000572665 ATG5Q9H1Y0 275 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 DCSTAMPQ9H295 470 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 EDA2RQ9HAV5 297 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 TECRQ9NZ01 308 aaKnown RBP7.01□□□□□ -1.29
CIITA-208ENST00000572665 ZNF257Q9Y2Q1 563 aa7.01□□□□□ -1.29
CIITA-208ENST00000572665 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7□□□□□ -1.29
CIITA-208ENST00000572665 TRBV9A0A0B4J1U6 114 aa7□□□□□ -1.29
CIITA-208ENST00000572665 TRDV1A0A1B0GX56 115 aa7□□□□□ -1.29
CIITA-208ENST00000572665 FCGR3BO75015 233 aa7□□□□□ -1.29
CIITA-208ENST00000572665 APELAP0DMC3 54 aa7□□□□□ -1.29
CIITA-208ENST00000572665 MAS1LP35410 378 aa7□□□□□ -1.29
CIITA-208ENST00000572665 CD81P60033 236 aa7□□□□□ -1.29
CIITA-208ENST00000572665 ANKRD55Q3KP44 614 aa7□□□□□ -1.29
CIITA-208ENST00000572665 ZFAND6Q6FIF0 208 aa7□□□□□ -1.29
CIITA-208ENST00000572665 TTC9CQ8N5M4 171 aa7□□□□□ -1.29
CIITA-208ENST00000572665 NDUFB11Q9NX14 153 aa7□□□□□ -1.29
CIITA-208ENST00000572665 ZNF230Q9UIE0 474 aaPredicted RBP7□□□□□ -1.29
CIITA-208ENST00000572665 KCNK7Q9Y2U2 307 aa7□□□□□ -1.29
CIITA-208ENST00000572665 OR2W1Q9Y3N9 320 aa7□□□□□ -1.29
CIITA-208ENST00000572665 CEPT1Q9Y6K0 416 aa7□□□□□ -1.29
CIITA-208ENST00000572665 RPS10-NUDT3A0A1W2PQS6 291 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 SRRM4A7MD48 611 aaKnown RBP6.99□□□□□ -1.29
CIITA-208ENST00000572665 CYB5BO43169 146 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 GGCTO75223 188 aaKnown RBP6.99□□□□□ -1.29
CIITA-208ENST00000572665 NDUFB4O95168 129 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 HRASP01112 189 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 HIST1H1BP16401 226 aaKnown RBP6.99□□□□□ -1.29
CIITA-208ENST00000572665 KIR2DS2P43631 304 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 GNG2P59768 71 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 C15orf32Q32M92 178 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 HACD4Q5VWC8 232 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 OR4A47Q6IF82 309 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 CNIH2Q6PI25 160 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 IL34Q6ZMJ4 242 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 IDO2Q6ZQW0 420 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 SLC16A13Q7RTY0 426 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 TSPAN14Q8NG11 270 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 MAFIPQ8WZ33 124 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 OR2A7Q96R45 310 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 NEURL2Q9BR09 285 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 ST6GALNAC5Q9BVH7 336 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 OR51E2Q9H255 320 aa6.99□□□□□ -1.29
CIITA-208ENST00000572665 ZNF430Q9H8G1 570 aaPredicted RBP6.99□□□□□ -1.29
CIITA-208ENST00000572665 RBMX2Q9Y388 322 aaKnown RBP6.99□□□□□ -1.29
CIITA-208ENST00000572665 STAB2Q8WWQ8 2551 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 LGALS9O00182 355 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 TRBV12-3P01733 135 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 HLA-DQB1P01920 261 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 SAA1P0DJI8 122 aaPredicted RBP6.98□□□□□ -1.29
CIITA-208ENST00000572665 DEFA4P12838 97 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 RPL27AP46776 148 aaKnown RBP6.98□□□□□ -1.29
CIITA-208ENST00000572665 RFX2P48378 723 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 OR10A3P58181 314 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 ARPC4P59998 168 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 GUCA2BQ16661 112 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 CDNFQ49AH0 187 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 FAM106AQ4KMX7 169 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 TPRA1Q86W33 373 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 TCTEX1D2Q8WW35 142 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 BORCS5Q969J3 196 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 EEF1AKMT3Q96AZ1 226 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 CXorf58Q96LI9 332 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 CMTM3Q96MX0 182 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 FAM110AQ9BQ89 295 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 THYN1Q9P016 225 aa6.98□□□□□ -1.29
CIITA-208ENST00000572665 A0A087WXM4 84 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 OR11H12B2RN74 326 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 BMPR1BO00238 502 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 OR2J3O76001 311 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 KBTBD11O94819 623 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 OR2C1O95371 312 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 TOMM40O96008 361 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 ZNF182P17025 639 aaPredicted RBP6.97□□□□□ -1.29
CIITA-208ENST00000572665 PSMB9P28065 219 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 DEFA5Q01523 94 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 MSMO1Q15800 293 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 C22orf42Q6IC83 251 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 GPHB5Q86YW7 130 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 OR4A5Q8NH83 315 aa6.97□□□□□ -1.29
CIITA-208ENST00000572665 TMEM167AQ8TBQ9 72 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms