RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 LGI3Q8N145 548 aa16.75■□□□□ 0.27
UBFD1-210ENST00000571064 LRTM2Q8N967 370 aa16.75■□□□□ 0.27
UBFD1-210ENST00000571064 MINDY2Q8NBR6 621 aa16.75■□□□□ 0.27
UBFD1-210ENST00000571064 GPR146Q96CH1 333 aa16.75■□□□□ 0.27
UBFD1-210ENST00000571064 TEX50A0A1B0GTY4 177 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 C15orf61A6NNL5 157 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 SOX15O60248 233 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 SNAPC5O75971 98 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 ACTL6BO94805 426 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 ATG12O94817 140 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 HLA-AP01891 365 aaKnown RBP16.74■□□□□ 0.27
UBFD1-210ENST00000571064 FGF2P09038 288 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 VDAC1P21796 283 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 CD83Q01151 205 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 C4orf46Q504U0 113 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 UNQ5815/PRO19632Q6UWF5 114 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 TMEM14BQ9NUH8 114 aa16.74■□□□□ 0.27
UBFD1-210ENST00000571064 A0A0B4J2A0 478 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 HMX3A6NHT5 357 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 PF4P02776 101 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 SRPXP78539 464 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 EGFEM1PQ0D2K5 195 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 AKIRIN2Q53H80 203 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 NMSQ5H8A3 153 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 LSM10Q969L4 123 aaKnown RBP16.73■□□□□ 0.27
UBFD1-210ENST00000571064 RRNAD1Q96FB5 475 aaKnown RBP16.73■□□□□ 0.27
UBFD1-210ENST00000571064 RCC1LQ96I51 464 aaKnown RBP16.73■□□□□ 0.27
UBFD1-210ENST00000571064 FYTTD1Q96QD9 318 aaKnown RBP16.73■□□□□ 0.27
UBFD1-210ENST00000571064 SEC22CQ9BRL7 303 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 QTRT1Q9BXR0 403 aaKnown RBP16.73■□□□□ 0.27
UBFD1-210ENST00000571064 SHPKQ9UHJ6 478 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 PRNDQ9UKY0 176 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 OR51B2Q9Y5P1 312 aa16.73■□□□□ 0.27
UBFD1-210ENST00000571064 DUS4LO95620 317 aaKnown RBP16.72■□□□□ 0.27
UBFD1-210ENST00000571064 IGHG4P01861 327 aa16.72■□□□□ 0.27
UBFD1-210ENST00000571064 TMEM267Q0VDI3 215 aaPredicted RBP16.72■□□□□ 0.27
UBFD1-210ENST00000571064 DCTN2Q13561 401 aaKnown RBP16.72■□□□□ 0.27
UBFD1-210ENST00000571064 LCNL1Q6ZST4 164 aa16.72■□□□□ 0.27
UBFD1-210ENST00000571064 OR4A16Q8NH70 328 aa16.72■□□□□ 0.27
UBFD1-210ENST00000571064 MARVELD1Q9BSK0 173 aa16.72■□□□□ 0.27
UBFD1-210ENST00000571064 COMMD5Q9GZQ3 224 aa16.72■□□□□ 0.27
UBFD1-210ENST00000571064 FOXA2Q9Y261 457 aaPredicted RBP16.72■□□□□ 0.27
UBFD1-210ENST00000571064 A0A1W2PN81 502 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 IGLV1-40P01703 118 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 CHRNA7P36544 502 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 SLC35B1P78383 322 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 FAM219AQ8IW50 185 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 OR5T1Q8NG75 326 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 RNASE11Q8TAA1 199 aaKnown RBP16.71■□□□□ 0.27
UBFD1-210ENST00000571064 MITD1Q8WV92 249 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 PHB2Q99623 299 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 SPIN2AQ99865 258 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 SPIN2BQ9BPZ2 258 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 GON7Q9BXV9 100 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 NDUFA4L2Q9NRX3 87 aa16.71■□□□□ 0.27
UBFD1-210ENST00000571064 INMT-MINDY4F8WBC2 141 aa16.7■□□□□ 0.26
UBFD1-210ENST00000571064 IL5P05113 134 aa16.7■□□□□ 0.26
UBFD1-210ENST00000571064 AREGP15514 252 aa16.7■□□□□ 0.26
UBFD1-210ENST00000571064 PLET1Q6UQ28 207 aa16.7■□□□□ 0.26
UBFD1-210ENST00000571064 RNF152Q8N8N0 203 aa16.7■□□□□ 0.26
UBFD1-210ENST00000571064 OR10W1Q8NGF6 305 aa16.7■□□□□ 0.26
UBFD1-210ENST00000571064 OR1L8Q8NGR8 309 aa16.7■□□□□ 0.26
UBFD1-210ENST00000571064 KLK15Q9H2R5 256 aa16.7■□□□□ 0.26
UBFD1-210ENST00000571064 CACNG5Q9UF02 275 aa16.7■□□□□ 0.26
UBFD1-210ENST00000571064 DUXBA0A1W2PPF3 345 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 IGLC7A0M8Q6 106 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 ST8SIA3O43173 380 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 PTTG1O95997 202 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 TRAPPC2P0DI81 140 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 TRAPPC2BP0DI82 140 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 PSMB8P28062 276 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 HSPE1P61604 102 aaKnown RBP16.69■□□□□ 0.26
UBFD1-210ENST00000571064 FOXE3Q13461 319 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 AARDQ4LEZ3 155 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 TEX38Q6PEX7 206 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 C19orf35Q6ZS72 473 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 ZNF429Q86V71 674 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 ZNF431Q8TF32 576 aaPredicted RBP16.69■□□□□ 0.26
UBFD1-210ENST00000571064 TMEM68Q96MH6 324 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 FKBP11Q9NYL4 201 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 U3KQK5 164 aa16.69■□□□□ 0.26
UBFD1-210ENST00000571064 ADAP1O75689 374 aa16.68■□□□□ 0.26
UBFD1-210ENST00000571064 HOXB5P09067 269 aa16.68■□□□□ 0.26
UBFD1-210ENST00000571064 KIAA0141Q14154 515 aaPredicted RBP16.68■□□□□ 0.26
UBFD1-210ENST00000571064 TTC9CQ8N5M4 171 aa16.68■□□□□ 0.26
UBFD1-210ENST00000571064 COMMD1Q8N668 190 aa16.68■□□□□ 0.26
UBFD1-210ENST00000571064 OR4X2Q8NGF9 303 aa16.68■□□□□ 0.26
UBFD1-210ENST00000571064 OR5B3Q8NH48 314 aa16.68■□□□□ 0.26
UBFD1-210ENST00000571064 COQ8AQ8NI60 647 aa16.68■□□□□ 0.26
UBFD1-210ENST00000571064 HINT2Q9BX68 163 aa16.68■□□□□ 0.26
UBFD1-210ENST00000571064 ZNF257Q9Y2Q1 563 aa16.68■□□□□ 0.26
UBFD1-210ENST00000571064 TCRBV4S1A1TA0A5B7 111 aa16.67■□□□□ 0.26
UBFD1-210ENST00000571064 RPLP1P05386 114 aaKnown RBP16.67■□□□□ 0.26
UBFD1-210ENST00000571064 ELANEP08246 267 aa16.67■□□□□ 0.26
UBFD1-210ENST00000571064 WT1-ASQ06250 92 aa16.67■□□□□ 0.26
UBFD1-210ENST00000571064 SPINK9Q5DT21 86 aa16.67■□□□□ 0.26
UBFD1-210ENST00000571064 GGNBP1Q5YKI7 109 aa16.67■□□□□ 0.26
UBFD1-210ENST00000571064 OR5M8Q8NGP6 311 aa16.67■□□□□ 0.26
UBFD1-210ENST00000571064 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.67■□□□□ 0.26
UBFD1-210ENST00000571064 TMED3Q9Y3Q3 217 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms