RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RPLP1P05386 114 aaKnown RBP10.36□□□□□ -0.75
CCDC40-205ENST00000571028 MAS1LP35410 378 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 C4orf46Q504U0 113 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 TMEM128Q5BJH2 165 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 CXorf66Q5JRM2 361 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-205ENST00000571028 SLC25A42Q86VD7 318 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 LINC00482Q8N8I6 264 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 ENKURQ8TC29 256 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 RBPMSQ93062 196 aaKnown RBP10.36□□□□□ -0.75
CCDC40-205ENST00000571028 C20orf85Q9H1P6 137 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 COA4Q9NYJ1 87 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 FOXA2Q9Y261 457 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-205ENST00000571028 A0A0G2JRQ6 117 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 TEX50A0A1B0GTY4 177 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 DBX1A6NMT0 343 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 NUDT19A8MXV4 375 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 SOX15O60248 233 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 CDS2O95674 445 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 REG1AP05451 166 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 IL6RP08887 468 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-205ENST00000571028 PPIFP30405 207 aaKnown RBP10.35□□□□□ -0.75
CCDC40-205ENST00000571028 SLC6A1P30531 599 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 MECP2P51608 486 aaKnown RBP10.35□□□□□ -0.75
CCDC40-205ENST00000571028 DEFA1P59665 94 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 DEFA3P59666 94 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 DEFA5Q01523 94 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 CFHR3Q02985 330 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 AKIRIN2Q53H80 203 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 SPINK9Q5DT21 86 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 ASPHD1Q5U4P2 390 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 LGI3Q8N145 548 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 SLC35G3Q8N808 338 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 GALNT14Q96FL9 552 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 OR5B12Q96R08 314 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 SPIN2AQ99865 258 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 SPIN2BQ9BPZ2 258 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 QTRT1Q9BXR0 403 aaKnown RBP10.35□□□□□ -0.75
CCDC40-205ENST00000571028 KLK15Q9H2R5 256 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 NUDT15Q9NV35 164 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 PRNDQ9UKY0 176 aa10.35□□□□□ -0.75
CCDC40-205ENST00000571028 LCE6AA0A183 80 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 NXPH3O95157 252 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 IGHG4P01861 327 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 HLA-AP01891 365 aaKnown RBP10.34□□□□□ -0.75
CCDC40-205ENST00000571028 PRH1P02810 166 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 H2AFB2P0C5Z0 115 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 OR4E1P0C645 316 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 LYL1P12980 280 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 AREGP15514 252 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 FOXE3Q13461 319 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 ANKRD55Q3KP44 614 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 C19orf35Q6ZS72 473 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 C18orf65Q6ZTR6 163 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 LYZL2Q7Z4W2 148 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 MRPL41Q8IXM3 137 aaKnown RBP10.34□□□□□ -0.75
CCDC40-205ENST00000571028 COMMD1Q8N668 190 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 MINDY2Q8NBR6 621 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 OR52B4Q8NGK2 314 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 OR1L8Q8NGR8 309 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 GPR146Q96CH1 333 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 ASCL2Q99929 193 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 RYR2Q92736 4967 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 TENM2Q9NT68 2774 aa10.34□□□□□ -0.75
CCDC40-205ENST00000571028 A0A1B0GW64 132 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 C9orf170A2RU37 121 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 CGB1A6NKQ9 187 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 C15orf61A6NNL5 157 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 TEX22C9J3V5 150 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 TRGV3P03979 118 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 ELANEP08246 267 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 TRAPPC2P0DI81 140 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 TRAPPC2BP0DI82 140 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 CRIP2P52943 208 aaPredicted RBP10.33□□□□□ -0.76
CCDC40-205ENST00000571028 TPPP2P59282 170 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 SRPXP78539 464 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 C19orf54Q5BKX5 351 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 OR10W1Q8NGF6 305 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 TMEM56Q96MV1 263 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 SEC22CQ9BRL7 303 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 GAR1Q9NY12 217 aaKnown RBP10.33□□□□□ -0.76
CCDC40-205ENST00000571028 FKBP11Q9NYL4 201 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 CACNG5Q9UF02 275 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 ZNF580Q9UK33 172 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 TMEM56-RWDD3S4R434 201 aa10.33□□□□□ -0.76
CCDC40-205ENST00000571028 A0A0B4J293 547 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 IFNA17P01571 189 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 IGHV3-11P01762 117 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 HOXB5P09067 269 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 OR13C7P0DN81 318 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 PSMB8P28062 276 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 RAB9AP51151 201 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 UBE2MP61081 183 aaKnown RBP10.32□□□□□ -0.76
CCDC40-205ENST00000571028 RPL23AP62750 156 aaKnown RBP10.32□□□□□ -0.76
CCDC40-205ENST00000571028 Q6ZRM9 215 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 NRARPQ7Z6K4 114 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 LYG2Q86SG7 212 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 UXS1Q8NBZ7 420 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 KLHL30-AS1Q8NEE0 82 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 OR5M8Q8NGP6 311 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 IL22RA2Q969J5 263 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms