RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 KLHL30-AS1Q8NEE0 82 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 OR51D1Q8NGF3 324 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 OR4P4Q8NGL7 312 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 OR4K15Q8NH41 348 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 RFESDQ8TAC1 157 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 PLPPR1Q8TBJ4 325 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 MRAPQ8TCY5 172 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 PCNPQ8WW12 178 aaKnown RBP2.94□□□□□ -1.94
NUP88-202ENST00000570937 RAB3CQ96E17 227 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 ZNF414Q96IQ9 312 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 S1PR3Q99500 378 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 FAAP24Q9BTP7 215 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TM2D1Q9BX74 207 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 GON7Q9BXV9 100 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TAF9BQ9HBM6 251 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 ZNF286AQ9HBT8 521 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 C12orf4Q9NQ89 552 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TXNL4BQ9NX01 149 aaKnown RBP2.94□□□□□ -1.94
NUP88-202ENST00000570937 NDUFA13Q9P0J0 144 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 JPT1Q9UK76 154 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 GPR132Q9UNW8 380 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 PSG11Q9UQ72 335 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 SVEP1Q4LDE5 3571 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 COL6A5A8TX70 2615 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TRAV39A0A0B4J263 110 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 A6NDX4 124 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 NCBP2LA6PVI3 153 aaKnown RBP2.93□□□□□ -1.94
NUP88-202ENST00000570937 LY6LH3BQJ8 138 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 C15orf65H3BRN8 121 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 HSD17B6O14756 317 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 AIREO43918 545 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 YPEL1O60688 119 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 MMP23AO75900 390 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 NAPSAO96009 420 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 HBZP02008 142 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 CD3GP09693 182 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 CTXN2P0C2S0 81 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 CEACAM6P40199 344 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 RAB13P51153 203 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 QRFPP83859 136 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 PITPNAQ00169 270 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 ZNF816Q0VGE8 651 aaPredicted RBP2.93□□□□□ -1.94
NUP88-202ENST00000570937 CBX3Q13185 183 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 UNC119Q13432 240 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 ARFRP1Q13795 201 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 NDUFA5Q16718 116 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 OR10K2Q6IF99 312 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 C6orf201Q7Z4U5 140 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 MOB3BQ86TA1 216 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 TGIF2LXQ8IUE1 241 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 LINC00311Q8N616 119 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 OR8H1Q8NGG4 311 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 OR10R2Q8NGX6 335 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 OR2T10Q8NGZ9 312 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 OR10J5Q8NHC4 309 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 LINC01006Q8NI28 216 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 MRPL30Q8TCC3 161 aaKnown RBP2.93□□□□□ -1.94
NUP88-202ENST00000570937 PIFOQ8TCI5 191 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 IL1F10Q8WWZ1 152 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 RBM14Q96PK6 669 aaKnown RBP2.93□□□□□ -1.94
NUP88-202ENST00000570937 YPEL2Q96QA6 119 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 CMSS1Q9BQ75 279 aaKnown RBP2.93□□□□□ -1.94
NUP88-202ENST00000570937 SULT4A1Q9BR01 284 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 LPAR5Q9H1C0 372 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 ATG5Q9H1Y0 275 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 DIABLOQ9NR28 239 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 PIPOXQ9P0Z9 390 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 VSIG4Q9Y279 399 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 ETV7Q9Y603 341 aa2.93□□□□□ -1.94
NUP88-202ENST00000570937 A0A075B6Q4 140 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 TRBV6-6A0A0A6YYG2 114 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 A0A0A6YYH2 397 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 IGHV1-3A0A0C4DH29 117 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 SMIM31A0A1B0GVY4 71 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 A0A1W2PPE3 182 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 A6NJ64 397 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 FOXI3A8MTJ6 420 aaPredicted RBP2.92□□□□□ -1.94
NUP88-202ENST00000570937 TRDCB7Z8K6 153 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 CCSO14618 274 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 ITGB1BP1O14713 200 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 RAB29O14966 203 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 SOCS1O15524 211 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 FGF16O43320 207 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 LANCL1O43813 399 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 KBTBD11O94819 623 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 OR2F2O95006 317 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 DIRAS3O95661 229 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 MOSP00540 346 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 IGHV3-7P01780 117 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 RCC1P18754 421 aaPredicted RBP2.92□□□□□ -1.94
NUP88-202ENST00000570937 CD1BP29016 333 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 SDC2P34741 201 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 VDAC2P45880 294 aaPredicted RBP2.92□□□□□ -1.94
NUP88-202ENST00000570937 FHITP49789 147 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 ZNF137PP52743 207 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 CLDN12P56749 244 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 OR10A3P58181 314 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 GNG2P59768 71 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 SLC35B1P78383 322 aa2.92□□□□□ -1.94
NUP88-202ENST00000570937 MXD1Q05195 221 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms