RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 OPN1MW3P0DN78 364 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 CXCL3P19876 107 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 NUP62P37198 522 aaPredicted RBP5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 VDAC2P45880 294 aaPredicted RBP5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 COMPP49747 757 aaPredicted RBP5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 H2BFSP57053 126 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 HSPE1P61604 102 aaKnown RBP5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 UBA52P62987 128 aaKnown RBP5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 RPP30P78346 268 aaKnown RBP5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 PRCDQ00LT1 54 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 TNFRSF9Q07011 255 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 ECSCRQ19T08 205 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 FBLN7Q53RD9 439 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 SPINK9Q5DT21 86 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 C10orf55Q5SWW7 151 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 Q8N3U1 123 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR2T35Q8NGX2 323 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR2T6Q8NHC8 308 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 THAP6Q8TBB0 222 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 PIFOQ8TCI5 191 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 DTD1Q8TEA8 209 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 PPP1R1CQ8WVI7 109 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 HEYLQ9NQ87 328 aaPredicted RBP5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 HSPB7Q9UBY9 170 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 PAIP2BQ9ULR5 123 aaKnown RBP5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 DSCAML1Q8TD84 2053 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 FXYD6-FXYD2A0A087WZ82 144 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 SH2D7A6NKC9 451 aaPredicted RBP5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 AP4M1O00189 453 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 ATP6V0E1O15342 81 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 SYNGR2O43760 224 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 IFNA10P01566 189 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 CRYGBP07316 175 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 IAPPP10997 89 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 SNCAP37840 140 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 CAV2P51636 162 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 RPL23AP62750 156 aaKnown RBP5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 CX3CL1P78423 397 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 ERHP84090 104 aaKnown RBP5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 TMEM267Q0VDI3 215 aaPredicted RBP5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 PJVKQ0ZLH3 352 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 RAB32Q13637 225 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 C2orf68Q2NKX9 166 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 UNQ5815/PRO19632Q6UWF5 114 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZNF562Q6V9R5 426 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR4D5Q8NGN0 318 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR52E5Q8NH55 327 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 DCUN1D4Q92564 292 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 RAB40CQ96S21 281 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 HSPB9Q9BQS6 159 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 SRSF8Q9BRL6 282 aaKnown RBP5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 FAM103A1Q9BTL3 118 aaKnown RBP5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 GON7Q9BXV9 100 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 MAGT1Q9H0U3 335 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 RBKSQ9H477 322 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZC4H2Q9NQZ6 224 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 PLSCR3Q9NRY6 295 aa5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 RCL1Q9Y2P8 373 aaKnown RBP5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.22□□□□□ -1.57
CTDNEP1-204ENST00000570484 MYO9AB2RTY4 2548 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 IGHV7-81A0A0B4J1V7 117 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 TRAV41A0A0B4J266 112 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 TEX50A0A1B0GTY4 177 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 MSGN1A6NI15 193 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 H3BS24 57 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 K7EPK0 472 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 FCN1O00602 326 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 PITX3O75364 302 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 DEDDO75618 318 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 SCAF4O95104 1147 aaKnown RBP5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 MBPP02686 304 aaPredicted RBP5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 OR8U8P0C7N1 319 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 APELAP0DMC3 54 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 OR13C7P0DN81 318 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 DEFA4P12838 97 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 MYOD1P15172 320 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 PSMB6P28072 239 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 HTR2BP41595 481 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 SUB1P53999 127 aaKnown RBP eCLIP5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 POLR2GP62487 172 aaKnown RBP eCLIP5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 SLC35B1P78383 322 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 NDPQ00604 133 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 ZFP69Q49AA0 526 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 AARDQ4LEZ3 155 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 CXorf66Q5JRM2 361 aaPredicted RBP5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 Q6ZRM9 215 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 NOXA1Q86UR1 476 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 STX12Q86Y82 276 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 SLC24A4Q8NFF2 622 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 SGMS2Q8NHU3 365 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 TMEM68Q96MH6 324 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 RANGRFQ9HD47 186 aaPredicted RBP5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 ESM1Q9NQ30 184 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 ZNF355PQ9NSJ1 428 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 PSENENQ9NZ42 101 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 MBD2Q9UBB5 411 aa5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 STRAPQ9Y3F4 350 aaKnown RBP5.21□□□□□ -1.58
CTDNEP1-204ENST00000570484 YLPM1P49750 1951 aaKnown RBP5.2□□□□□ -1.58
CTDNEP1-204ENST00000570484 SETXQ7Z333 2677 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms