RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 OR1L8Q8NGR8 309 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 HLA-AP01891 365 aaKnown RBP12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 C8orf88P0DMB2 117 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 HLA-DMAP28067 261 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 LPAR6P43657 344 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 WT1-ASQ06250 92 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 CTF1Q16619 201 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 CASC10Q5T4H9 136 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 OR5B3Q8NH48 314 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 DYNLRB2Q8TF09 96 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 LSM10Q969L4 123 aaKnown RBP12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 MARC2Q969Z3 335 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TSC22D3Q99576 134 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 EDA2RQ9HAV5 297 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TMEM14BQ9NUH8 114 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 SLC2A8Q9NY64 477 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
MAP1LC3B-208ENST00000570189 CLEC3BP05452 202 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 SMIM18P0DKX4 95 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 S100GP29377 79 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 CD81P60033 236 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 MZT2AQ6P582 158 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 OR10W1Q8NGF6 305 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 OR1L6Q8NGR2 347 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 AP3S1Q92572 193 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 NEURL2Q9BR09 285 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 ZNF436Q9C0F3 470 aaPredicted RBP12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 PALMDQ9NP74 551 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 PRNDQ9UKY0 176 aa12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 F11RQ9Y624 299 aaKnown RBP12.87□□□□□ -0.35
MAP1LC3B-208ENST00000570189 KRASP01116 189 aa12.86□□□□□ -0.35
MAP1LC3B-208ENST00000570189 IGHV3-23P01764 117 aa12.86□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TBPP20226 339 aa12.86□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TSPAN5P62079 268 aa12.86□□□□□ -0.35
MAP1LC3B-208ENST00000570189 SEC22AQ96IW7 307 aa12.86□□□□□ -0.35
MAP1LC3B-208ENST00000570189 DYNC2H1Q8NCM8 4307 aaKnown RBP12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TRAV25A0A0B4J276 109 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 C15orf61A6NNL5 157 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TGOLN2O43493 480 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 HPGDSO60760 199 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 SNAPC5O75971 98 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 OR13C7P0DN81 318 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 ZNF182P17025 639 aaPredicted RBP12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 EDN2P20800 178 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 G6PCP35575 357 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 RND3P61587 244 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 SPSB3Q6PJ21 355 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 LHFPL1Q86WI0 220 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 C15orf40Q8WUR7 153 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 BSCL2Q96G97 398 aaPredicted RBP12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 ZNF486Q96H40 463 aaPredicted RBP12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TMEM56Q96MV1 263 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 MRPL27Q9P0M9 148 aaKnown RBP12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 S4R3C0 116 aa12.85□□□□□ -0.35
MAP1LC3B-208ENST00000570189 CD7P09564 240 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 LYL1P12980 280 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 RPA2P15927 270 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 GPR183P32249 361 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 ZNF57Q68EA5 555 aaPredicted RBP12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 PLET1Q6UQ28 207 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TBC1D26Q86UD7 250 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TMEM61Q8N0U2 210 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 ARRDC1Q8N5I2 433 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 ZNF114Q8NC26 417 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 ISOC1Q96CN7 298 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 LYSTQ99698 3801 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 MLXQ9UH92 298 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 CEPT1Q9Y6K0 416 aa12.84□□□□□ -0.35
MAP1LC3B-208ENST00000570189 STARD9Q9P2P6 4700 aa12.83□□□□□ -0.35
MAP1LC3B-208ENST00000570189 IGKV1-39P01597 117 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 IGKV1D-39P04432 117 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 FCGR2BP31994 310 aaPredicted RBP12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 MFAP2P55001 183 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 PHLDA2Q53GA4 152 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 GPR107Q5VW38 600 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 UNQ9165/PRO28630Q6UXU0 137 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 OR1P1Q8NH06 330 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 CACNG8Q8WXS5 425 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 TMEM190Q8WZ59 177 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 WDR89Q96FK6 387 aaPredicted RBP12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 NAA50Q9GZZ1 169 aaKnown RBP12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 HIPK2Q9H2X6 1198 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 PLEKHA3Q9HB20 300 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 MTFP1Q9UDX5 166 aa12.83□□□□□ -0.36
MAP1LC3B-208ENST00000570189 ZNF320A2RRD8 509 aa12.82□□□□□ -0.36
MAP1LC3B-208ENST00000570189 OR11H12B2RN74 326 aa12.82□□□□□ -0.36
MAP1LC3B-208ENST00000570189 F8W735 103 aaPredicted RBP12.82□□□□□ -0.36
MAP1LC3B-208ENST00000570189 IFNA6P05013 189 aa12.82□□□□□ -0.36
MAP1LC3B-208ENST00000570189 ANKRD55Q3KP44 614 aa12.82□□□□□ -0.36
MAP1LC3B-208ENST00000570189 SLC25A24Q6NUK1 477 aa12.82□□□□□ -0.36
MAP1LC3B-208ENST00000570189 SLC16A13Q7RTY0 426 aa12.82□□□□□ -0.36
MAP1LC3B-208ENST00000570189 RBMY1BA6NDE4 496 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms