RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CCL15Q16663 113 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 LINC00336Q6ZUF6 198 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 SLC36A1Q7Z2H8 476 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 BLIDQ8IZY5 108 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 SYS1Q8N2H4 156 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 TCTEX1D1Q8N7M0 179 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 GPR32P1Q8NGA4 272 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 OR4X1Q8NH49 305 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 ZNF418Q8TF45 676 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 THEM6Q8WUY1 208 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 PSMG3Q9BT73 122 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 PBDC1Q9BVG4 233 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 SCRT1Q9BWW7 348 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 NPVFQ9HCQ7 196 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 LYRM2Q9NU23 88 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 NDUFB11Q9NX14 153 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 BOKQ9UMX3 212 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 LSM2Q9Y333 95 aaKnown RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 TICRRQ7Z2Z1 1910 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 PRG4Q92954 1404 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 AFDNP55196 1824 aaKnown RBP3.68□□□□□ -1.82
UBR1-208ENST00000569066 IGHV5-51A0A0C4DH38 117 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 IGHV3-66A0A0C4DH42 116 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 IGKV1-8A0A0C4DH67 115 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 IGHV1-69-2A0A0G2JMI3 117 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 IGLC7A0M8Q6 106 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 SLC22A20A6NK97 555 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.68□□□□□ -1.82
UBR1-208ENST00000569066 SLC17A3O00476 420 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 TAAR5O14804 337 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 HYPMO75409 117 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 HLA-DPB1P04440 258 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 CTSLP07711 333 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 GABRA3P34903 492 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 GLRXP35754 106 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 LPAR6P43657 344 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 PRLHRP49683 370 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 PSG9Q00887 426 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 MEF2BQ02080 365 aaPredicted RBP3.68□□□□□ -1.82
UBR1-208ENST00000569066 ERCC8Q13216 396 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 ZNF345Q14585 488 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 RBMY1FQ15415 496 aaKnown RBP3.68□□□□□ -1.82
UBR1-208ENST00000569066 TOMM5Q8N4H5 51 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 OR10G4Q8NGN3 311 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 OR4A5Q8NH83 315 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 DEFB129Q9H1M3 183 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 RERGLQ9H628 205 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 FUT9Q9Y231 359 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 ADGRB1O14514 1584 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 BAZ2AQ9UIF9 1905 aaKnown RBP3.68□□□□□ -1.82
UBR1-208ENST00000569066 ARHGAP5Q13017 1502 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 ZFYVE16Q7Z3T8 1539 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 ANKRD12Q6UB98 2062 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 DOCK2Q92608 1830 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 TRAV8-7A0A075B6U6 113 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 TRAV8-6A0A0B4J262 113 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 A0A1B0GVX0 72 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 UMAD1C9J7I0 102 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 J3QLI3 93 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 CREBL2O60519 120 aaPredicted RBP3.68□□□□□ -1.82
UBR1-208ENST00000569066 HSBP1O75506 76 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 FOXH1O75593 365 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 NRASP01111 189 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 IFNA1P01562 189 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 SMIM17P0DL12 118 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 IGLC2P0DOY2 106 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 IGLC3P0DOY3 106 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 SLC35A1P78382 337 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 ARG2P78540 354 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 TRMT12Q53H54 448 aaKnown RBP3.68□□□□□ -1.82
UBR1-208ENST00000569066 OR6N2Q8NGY6 317 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 SRSF12Q8WXF0 261 aaKnown RBP3.68□□□□□ -1.82
UBR1-208ENST00000569066 SCGB3A2Q96PL1 93 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 OR4K3Q96R72 315 aa3.68□□□□□ -1.82
UBR1-208ENST00000569066 PATZ1Q9HBE1 687 aaKnown RBP3.68□□□□□ -1.82
UBR1-208ENST00000569066 PHLPP1O60346 1717 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 XRN1Q8IZH2 1706 aaKnown RBP3.67□□□□□ -1.82
UBR1-208ENST00000569066 CUL7Q14999 1698 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 PTPRJQ12913 1337 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 DEPDC5O75140 1603 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 RGPD8O14715 1765 aaPredicted RBP3.67□□□□□ -1.82
UBR1-208ENST00000569066 RGPD5Q99666 1765 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.67□□□□□ -1.82
UBR1-208ENST00000569066 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 A0A0G2JMM0 328 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 LOC285095A0A1B0GVY8 99 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 A0A1W2PPB8 328 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 FAM159BA6NKW6 160 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 IFITM5A6NNB3 132 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 BBIP1A8MTZ0 92 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 SNRPGP15A8MWD9 76 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 KIR3DP1A8MWS1 328 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 DEGS1O15121 323 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 ATF1P18846 271 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 RPL22P35268 128 aaKnown RBP3.67□□□□□ -1.82
UBR1-208ENST00000569066 ARL2P36404 184 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 P2RX1P51575 399 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 GLIPR1L1Q6UWM5 242 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 C15orf56Q8N910 161 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 RBMXL1Q96E39 390 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms