RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 MARCH1Q8TCQ1 289 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 TOMM40LQ969M1 308 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 TMEM230Q96A57 120 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 C10orf35Q96D05 121 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 SLAMF6Q96DU3 332 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 RAB3CQ96E17 227 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 RRNAD1Q96FB5 475 aaKnown RBP8.53□□□□□ -1.04
CDH3-208ENST00000569036 ABHD14BQ96IU4 210 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 HIST1H2AAQ96QV6 131 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 RGCCQ9H4X1 137 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 C5orf66Q9H5L9 145 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 CENPMQ9NSP4 180 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 FAM206AQ9NX38 181 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 NSG2Q9Y328 171 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.05
CDH3-208ENST00000569036 A0A0J9YWU9 116 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 SYT7O43581 403 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 IFNA10P01566 189 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 CTSDP07339 412 aaPredicted RBP8.52□□□□□ -1.05
CDH3-208ENST00000569036 ZNF44P15621 663 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 ZNF20P17024 532 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 RPL12P30050 165 aaKnown RBP8.52□□□□□ -1.05
CDH3-208ENST00000569036 SNCAP37840 140 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 LPAR6P43657 344 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 MOGAT2Q3SYC2 334 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
CDH3-208ENST00000569036 Q6ZRG5 221 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 FAM57BQ71RH2 274 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 Q8N1X5 172 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 FAM89BQ8N5H3 189 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 LRTM2Q8N967 370 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 Q8N9W7 124 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 ADAD2Q8NCV1 583 aaKnown RBP8.52□□□□□ -1.05
CDH3-208ENST00000569036 RPEQ96AT9 228 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 CPNE2Q96FN4 548 aaPredicted RBP8.52□□□□□ -1.05
CDH3-208ENST00000569036 HSPB9Q9BQS6 159 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 GINS3Q9BRX5 216 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 ELOVL1Q9BW60 279 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 TMEM59Q9BXS4 323 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 LPAR5Q9H1C0 372 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 HRH4Q9H3N8 390 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 HES4Q9HCC6 221 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 NIT2Q9NQR4 276 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 TPSG1Q9NRR2 321 aa8.52□□□□□ -1.05
CDH3-208ENST00000569036 NCBP2LA6PVI3 153 aaKnown RBP8.51□□□□□ -1.05
CDH3-208ENST00000569036 LINC00587B1AMM8 73 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 UMAD1C9J7I0 102 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 ZNF878C9JN71 531 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 CDK2AP2O75956 126 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 GLAP06280 429 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 ZNF93P35789 620 aaPredicted RBP8.51□□□□□ -1.05
CDH3-208ENST00000569036 P2RY1P47900 373 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 IL13RA2Q14627 380 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 CEACAM21Q3KPI0 293 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 ZNF600Q6ZNG1 722 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 OR51A2Q8NGJ7 313 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 OVOL2Q9BRP0 275 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 TOLLIPQ9H0E2 274 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 SLC35B3Q9H1N7 401 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 OR10A2Q9H208 303 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 KCNK15Q9H427 330 aa8.51□□□□□ -1.05
CDH3-208ENST00000569036 MRPS28Q9Y2Q9 187 aaKnown RBP8.51□□□□□ -1.05
CDH3-208ENST00000569036 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 C7orf77A4D0Y5 90 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 H0Y980 276 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 RTL8CO15255 209 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 TTRP02766 147 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 CSN2P05814 226 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 OR5H8P0DN80 308 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 AKR1C2P52895 323 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 ZNF121P58317 390 aaPredicted RBP8.5□□□□□ -1.05
CDH3-208ENST00000569036 GRB2P62993 217 aaKnown RBP8.5□□□□□ -1.05
CDH3-208ENST00000569036 SUPT4H1P63272 117 aaKnown RBP8.5□□□□□ -1.05
CDH3-208ENST00000569036 SRPXP78539 464 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 SRSF3P84103 164 aaKnown RBP8.5□□□□□ -1.05
CDH3-208ENST00000569036 AKR1C1Q04828 323 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 RAB32Q13637 225 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 CLINT1Q14677 625 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 GUK1Q16774 197 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 ODF4Q2M2E3 257 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 UTF1Q5T230 341 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 DPPA3Q6W0C5 159 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 HEPN1Q6WQI6 88 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 C2CD4CQ8TF44 421 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 PHLDA1Q8WV24 401 aaPredicted RBP8.5□□□□□ -1.05
CDH3-208ENST00000569036 GALNT14Q96FL9 552 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 TM2D1Q9BX74 207 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 PBOV1Q9GZY1 135 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 RPS10P5Q9NQ39 176 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 OR5AC2Q9NZP5 309 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 ZNF580Q9UK33 172 aa8.5□□□□□ -1.05
CDH3-208ENST00000569036 SRRM2Q9UQ35 2752 aaKnown RBP8.49□□□□□ -1.05
CDH3-208ENST00000569036 MSGN1A6NI15 193 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 OR5B21A6NL26 309 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 FOXI3A8MTJ6 420 aaPredicted RBP8.49□□□□□ -1.05
CDH3-208ENST00000569036 B4DEV8 164 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 J3QT63 122 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 NDUFS6O75380 124 aaKnown RBP8.49□□□□□ -1.05
CDH3-208ENST00000569036 IGLV1-40P01703 118 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms