RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 OR2W1Q9Y3N9 320 aa9.12□□□□□ -0.95
SNX29-207ENST00000568949 MFNGO00587 321 aa9.11□□□□□ -0.95
SNX29-207ENST00000568949 HRASP01112 189 aa9.11□□□□□ -0.95
SNX29-207ENST00000568949 HLA-DQB1P01920 261 aa9.11□□□□□ -0.95
SNX29-207ENST00000568949 HLA-GP17693 338 aa9.11□□□□□ -0.95
SNX29-207ENST00000568949 CLDN12P56749 244 aa9.11□□□□□ -0.95
SNX29-207ENST00000568949 NR2C2APQ86WQ0 139 aa9.11□□□□□ -0.95
SNX29-207ENST00000568949 ATP6V0BQ99437 205 aa9.11□□□□□ -0.95
SNX29-207ENST00000568949 SRSF8Q9BRL6 282 aaKnown RBP9.11□□□□□ -0.95
SNX29-207ENST00000568949 TMEM272A0A1B0GTI8 110 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 IGLC7A0M8Q6 106 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 J3QRK9 145 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 NDUFA4O00483 81 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 DEFB4AO15263 64 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 IGLV2-14P01704 120 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 RPA2P15927 270 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 HIST1H1DP16402 221 aaKnown RBP9.1□□□□□ -0.95
SNX29-207ENST00000568949 GNB3P16520 340 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 TALDO1P37837 337 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 OR2B8PP59922 312 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 SPSB3Q6PJ21 355 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 SSX9Q7RTT3 188 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 OR10R2Q8NGX6 335 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 TCTEX1D2Q8WW35 142 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 BSCL2Q96G97 398 aaPredicted RBP9.1□□□□□ -0.95
SNX29-207ENST00000568949 AIFM2Q9BRQ8 373 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 KRTAP4-5Q9BYR2 181 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 BET1LQ9NYM9 111 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 DNAH11Q96DT5 4516 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 FAT2Q9NYQ8 4349 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 DNAH17Q9UFH2 4485 aa9.1□□□□□ -0.95
SNX29-207ENST00000568949 IGKV1D-8A0A087WSZ0 117 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 LOC100506127A0A0U1RQW1 187 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 RAB27BO00194 218 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 RTL8CO15255 209 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 CYB5BO43169 146 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 CTXN2P0C2S0 81 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 BRWD1-AS2P59051 145 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 PLA2G7Q13093 441 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 EIF4EBP1Q13541 118 aaPredicted RBP9.09□□□□□ -0.95
SNX29-207ENST00000568949 TMEM187Q14656 261 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 ZNF124Q15973 351 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 HES5Q5TA89 166 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 MFSD4AQ8N468 514 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 C20orf24Q9BUV8 137 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 SMPXQ9UHP9 88 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 ETV7Q9Y603 341 aa9.09□□□□□ -0.95
SNX29-207ENST00000568949 DYNC1H1Q14204 4646 aaKnown RBP9.09□□□□□ -0.95
SNX29-207ENST00000568949 IGHV4-4A0A075B6R2 117 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 TRAV10A0A0B4J240 114 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 OR2T8A6NH00 312 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 C15orf62A8K5M9 175 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 CA1P00915 261 aaPredicted RBP9.08□□□□□ -0.96
SNX29-207ENST00000568949 DTYMKP23919 212 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 SFXN4Q6P4A7 337 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 ZNF66Q6ZN08 573 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 Q8NAQ8 132 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 SPATA2Q9UM82 520 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 DNAH2Q9P225 4427 aa9.08□□□□□ -0.96
SNX29-207ENST00000568949 A0A075B6Q4 140 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 A0A0A6YYH2 397 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 IGKV1D-13A0A0B4J2D9 117 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 A6NJ64 397 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 C15orf61A6NNL5 157 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 FGF2P09038 288 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 IGKV1-13P0DP09 117 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 NFYAP23511 347 aaPredicted RBP9.07□□□□□ -0.96
SNX29-207ENST00000568949 HLA-DMBP28068 263 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 SDC2P34741 201 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 PVRIGQ6DKI7 326 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 POM121L12Q8N7R1 296 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 GDPD1Q8N9F7 314 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 RNF2Q99496 336 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 CHRDL1Q9BU40 450 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 RNF126Q9BV68 326 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 MRPS26Q9BYN8 205 aaKnown RBP9.07□□□□□ -0.96
SNX29-207ENST00000568949 ATG5Q9H1Y0 275 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 HRASLSQ9HDD0 168 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 DAPK2Q9UIK4 370 aa9.07□□□□□ -0.96
SNX29-207ENST00000568949 CHEK1O14757 476 aa9.06□□□□□ -0.96
SNX29-207ENST00000568949 ZNF207O43670 478 aaKnown RBP9.06□□□□□ -0.96
SNX29-207ENST00000568949 OR10A3P58181 314 aa9.06□□□□□ -0.96
SNX29-207ENST00000568949 FAM90A2PQ658T7 463 aa9.06□□□□□ -0.96
SNX29-207ENST00000568949 THOC7Q6I9Y2 204 aaKnown RBP9.06□□□□□ -0.96
SNX29-207ENST00000568949 HSD17B13Q7Z5P4 300 aaPredicted RBP9.06□□□□□ -0.96
SNX29-207ENST00000568949 RHPN1-AS1Q9BWJ2 59 aa9.06□□□□□ -0.96
SNX29-207ENST00000568949 COMMD5Q9GZQ3 224 aa9.06□□□□□ -0.96
SNX29-207ENST00000568949 DIABLOQ9NR28 239 aa9.06□□□□□ -0.96
SNX29-207ENST00000568949 C21orf62Q9NYP8 219 aa9.06□□□□□ -0.96
SNX29-207ENST00000568949 TAS2R8Q9NYW2 309 aa9.06□□□□□ -0.96
SNX29-207ENST00000568949 IGHV3OR16-8A0A075B7F1 116 aa9.05□□□□□ -0.96
SNX29-207ENST00000568949 IGHV7-4-1A0A0J9YVY3 117 aa9.05□□□□□ -0.96
SNX29-207ENST00000568949 F8W735 103 aaPredicted RBP9.05□□□□□ -0.96
SNX29-207ENST00000568949 UPK2O00526 184 aa9.05□□□□□ -0.96
SNX29-207ENST00000568949 RBFOX2O43251 390 aaKnown RBP eCLIP9.05□□□□□ -0.96
SNX29-207ENST00000568949 RBMY1A1P0DJD3 496 aaKnown RBP9.05□□□□□ -0.96
SNX29-207ENST00000568949 RBMY1CP0DJD4 496 aa9.05□□□□□ -0.96
SNX29-207ENST00000568949 P0DMU3 169 aa9.05□□□□□ -0.96
SNX29-207ENST00000568949 FAM231AP0DMU4 169 aa9.05□□□□□ -0.96
SNX29-207ENST00000568949 FAM231CP0DMU5 169 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms