RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 HAPLN4Q86UW8 402 aa10.08□□□□□ -0.8
GGA2-213ENST00000568922 MRPL41Q8IXM3 137 aaKnown RBP10.08□□□□□ -0.8
GGA2-213ENST00000568922 SLC24A4Q8NFF2 622 aa10.08□□□□□ -0.8
GGA2-213ENST00000568922 OR10P1Q8NGE3 313 aa10.08□□□□□ -0.8
GGA2-213ENST00000568922 PINX1Q96BK5 328 aaKnown RBP10.08□□□□□ -0.8
GGA2-213ENST00000568922 ATP5SQ99766 215 aa10.08□□□□□ -0.8
GGA2-213ENST00000568922 C1RLQ9NZP8 487 aa10.08□□□□□ -0.8
GGA2-213ENST00000568922 TACC2O95359 2948 aa10.08□□□□□ -0.8
GGA2-213ENST00000568922 WNK2Q9Y3S1 2297 aa10.08□□□□□ -0.8
GGA2-213ENST00000568922 OR8U8P0C7N1 319 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 HTR2BP41595 481 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 RPL27AP46776 148 aaKnown RBP10.07□□□□□ -0.8
GGA2-213ENST00000568922 COMPP49747 757 aaPredicted RBP10.07□□□□□ -0.8
GGA2-213ENST00000568922 ERHP84090 104 aaKnown RBP10.07□□□□□ -0.8
GGA2-213ENST00000568922 ARL16Q0P5N6 197 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 OR8G2PQ6IF36 304 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 EIF5AL1Q6IS14 154 aaKnown RBP10.07□□□□□ -0.8
GGA2-213ENST00000568922 LILRB2Q8N423 598 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 ARV1Q9H2C2 271 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 FAM96BQ9Y3D0 163 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 A0A0U1RQK1 487 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 NPY1RP25929 384 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 SLC38A11Q08AI6 406 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 C5orf64Q2M2E5 130 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 FAM120AOSQ5T036 256 aa10.07□□□□□ -0.8
GGA2-213ENST00000568922 CGB1A6NKQ9 187 aa10.06□□□□□ -0.8
GGA2-213ENST00000568922 E7EUB6 86 aa10.06□□□□□ -0.8
GGA2-213ENST00000568922 IFNA5P01569 189 aa10.06□□□□□ -0.8
GGA2-213ENST00000568922 FBP1P09467 338 aa10.06□□□□□ -0.8
GGA2-213ENST00000568922 FBLN7Q53RD9 439 aa10.06□□□□□ -0.8
GGA2-213ENST00000568922 C10orf55Q5SWW7 151 aa10.06□□□□□ -0.8
GGA2-213ENST00000568922 ETV3LQ6ZN32 361 aa10.06□□□□□ -0.8
GGA2-213ENST00000568922 OR10W1Q8NGF6 305 aa10.06□□□□□ -0.8
GGA2-213ENST00000568922 GINS3Q9BRX5 216 aa10.06□□□□□ -0.8
GGA2-213ENST00000568922 NCBP2LA6PVI3 153 aaKnown RBP10.05□□□□□ -0.8
GGA2-213ENST00000568922 CA2P00918 260 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 SNCAP37840 140 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 RAB14P61106 215 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 GNB1P62873 340 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 BSXQ3C1V8 233 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 C2orf83Q53S99 150 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 HSD17B13Q7Z5P4 300 aaPredicted RBP10.05□□□□□ -0.8
GGA2-213ENST00000568922 NANPQ8TBE9 248 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 SRSF8Q9BRL6 282 aaKnown RBP10.05□□□□□ -0.8
GGA2-213ENST00000568922 TMEM147Q9BVK8 224 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 GGACTQ9BVM4 153 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 HELZ2Q9BYK8 2649 aaKnown RBP10.05□□□□□ -0.8
GGA2-213ENST00000568922 A0A1B0GW64 132 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 FCN1O00602 326 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 IFNA4P05014 189 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 SUB1P53999 127 aaKnown RBP eCLIP10.05□□□□□ -0.8
GGA2-213ENST00000568922 LRRC75BQ2VPJ9 315 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 TMEM170AQ8WVE7 144 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 TMED6Q8WW62 240 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 SRSF12Q8WXF0 261 aaKnown RBP10.05□□□□□ -0.8
GGA2-213ENST00000568922 PARD6GQ9BYG4 376 aaPredicted RBP10.05□□□□□ -0.8
GGA2-213ENST00000568922 APCP25054 2843 aa10.05□□□□□ -0.8
GGA2-213ENST00000568922 MED13LQ71F56 2210 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 PTPN13Q12923 2485 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 CSMD2Q7Z408 3487 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 CNIH1O95406 144 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 SEC11BP0C7V7 166 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 RNASE2P10153 161 aaKnown RBP10.04□□□□□ -0.8
GGA2-213ENST00000568922 SSBP2P81877 361 aaPredicted RBP10.04□□□□□ -0.8
GGA2-213ENST00000568922 WT1-ASQ06250 92 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 AANATQ16613 207 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 NDUFA5Q16718 116 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 VWC2Q2TAL6 325 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 CLLU1Q5K131 121 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 SLC25A24Q6NUK1 477 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 CIARTQ8N365 385 aaPredicted RBP10.04□□□□□ -0.8
GGA2-213ENST00000568922 SCGB1C1Q8TD33 95 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 SSX3Q99909 188 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 SLC25A32Q9H2D1 315 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 UQCC1Q9NVA1 299 aa10.04□□□□□ -0.8
GGA2-213ENST00000568922 PRRC2AP48634 2157 aaKnown RBP10.03□□□□□ -0.8
GGA2-213ENST00000568922 IGLC7A0M8Q6 106 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 PRSS46E5RG02 174 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 FSHBP01225 129 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 OR13C7P0DN81 318 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 SPP1P10451 314 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 DLK1P80370 383 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 FXYD3Q14802 87 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 ZNF562Q6V9R5 426 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 TEX29Q8N6K0 151 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 Q8N9W7 124 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 HSD17B11Q8NBQ5 300 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 LRRC20Q8TCA0 184 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 PIFOQ8TCI5 191 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 GNPNAT1Q96EK6 184 aaPredicted RBP10.03□□□□□ -0.8
GGA2-213ENST00000568922 RASL11BQ9BPW5 248 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 ASH1LQ9NR48 2969 aaKnown RBP10.03□□□□□ -0.8
GGA2-213ENST00000568922 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.03□□□□□ -0.86e-7■■■□□ 15.2
GGA2-213ENST00000568922 UBE2L5PA0A1B0GUS4 154 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 RPS10-NUDT3A0A1W2PQS6 291 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 TEX22C9J3V5 150 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 SMAD7O15105 426 aaKnown RBP10.03□□□□□ -0.8
GGA2-213ENST00000568922 FBXO24O75426 580 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 ATP6V0CP27449 155 aa10.03□□□□□ -0.8
GGA2-213ENST00000568922 TUSC1Q2TAM9 212 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms