RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MPTX1A8MV57 137 aa11.61□□□□□ -0.55
HERPUD1-215ENST00000568676 RPL35AP18077 110 aaKnown RBP11.61□□□□□ -0.55
HERPUD1-215ENST00000568676 RBMS2Q15434 407 aaKnown RBP11.61□□□□□ -0.55
HERPUD1-215ENST00000568676 C11orf45Q8TAV5 145 aa11.61□□□□□ -0.55
HERPUD1-215ENST00000568676 NUDCD2Q8WVJ2 157 aa11.61□□□□□ -0.55
HERPUD1-215ENST00000568676 BORCS5Q969J3 196 aa11.61□□□□□ -0.55
HERPUD1-215ENST00000568676 RARRES2Q99969 163 aa11.61□□□□□ -0.55
HERPUD1-215ENST00000568676 PLEKHA2Q9HB19 425 aa11.61□□□□□ -0.55
HERPUD1-215ENST00000568676 RAB26Q9ULW5 256 aa11.61□□□□□ -0.55
HERPUD1-215ENST00000568676 TMEM235A6NFC5 223 aa11.6□□□□□ -0.55
HERPUD1-215ENST00000568676 OR2T8A6NH00 312 aa11.6□□□□□ -0.55
HERPUD1-215ENST00000568676 SERPINE2P07093 398 aa11.6□□□□□ -0.55
HERPUD1-215ENST00000568676 OR13F1Q8NGS4 319 aa11.6□□□□□ -0.55
HERPUD1-215ENST00000568676 C2CD4CQ8TF44 421 aa11.6□□□□□ -0.55
HERPUD1-215ENST00000568676 SECTM1Q8WVN6 248 aa11.6□□□□□ -0.55
HERPUD1-215ENST00000568676 CCL28Q9NRJ3 127 aa11.6□□□□□ -0.55
HERPUD1-215ENST00000568676 C21orf62Q9NYP8 219 aa11.6□□□□□ -0.55
HERPUD1-215ENST00000568676 COMMD9Q9P000 198 aa11.6□□□□□ -0.55
HERPUD1-215ENST00000568676 NOTOA8MTQ0 251 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 TNFSF12O43508 249 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 CD5P06127 495 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 CTSDP07339 412 aaPredicted RBP11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 TRAPPC2P0DI81 140 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 TRAPPC2BP0DI82 140 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 RPA2P15927 270 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 FCGR2BP31994 310 aaPredicted RBP11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 FCGR2CP31995 323 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 SLC25A24Q6NUK1 477 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 CADM3Q8N126 398 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 BEST4Q8NFU0 473 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 DMBX1Q8NFW5 382 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 C20orf24Q9BUV8 137 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 Q9H521 79 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 TMEM140Q9NV12 185 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 BLOC1S6Q9UL45 172 aa11.59□□□□□ -0.55
HERPUD1-215ENST00000568676 SULT1C2O00338 296 aa11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 SSX5O60225 188 aa11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 MRPS14O60783 128 aaKnown RBP11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 S1PR2O95136 353 aa11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 PPYP01298 95 aa11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 OR13C7P0DN81 318 aa11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 RELQ04864 619 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 TPRA1Q86W33 373 aa11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 OR1L8Q8NGR8 309 aa11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 LSM10Q969L4 123 aaKnown RBP11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 SMPXQ9UHP9 88 aa11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 ETV7Q9Y603 341 aa11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 F11RQ9Y624 299 aaKnown RBP11.58□□□□□ -0.56
HERPUD1-215ENST00000568676 TRAV3A0A0B4J244 114 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 C11orf94C9JXX5 98 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 SCAND1P57086 179 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 ERVK-16P61578 105 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 WT1-ASQ06250 92 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 C22orf42Q6IC83 251 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 NR2C2APQ86WQ0 139 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 OR10W1Q8NGF6 305 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 OR11H2Q8NH07 326 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 SCARB1Q8WTV0 552 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 CNBD2Q96M20 576 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 CMTM3Q96MX0 182 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 GPHA2Q96T91 129 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 CHRDL1Q9BU40 450 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 SLC5A7Q9GZV3 580 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 FBXL17Q9UF56 701 aa11.57□□□□□ -0.56
HERPUD1-215ENST00000568676 HECTD4Q9Y4D8 3996 aa11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 FGF9P31371 208 aaPredicted RBP11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 NANOS2P60321 138 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 PAFAH1B2P68402 229 aa11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 HOGA1Q86XE5 327 aa11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 APRG1Q8IVJ8 170 aa11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 TMEM116Q8NCL8 245 aa11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 RHPN1-AS1Q9BWJ2 59 aa11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 NDUFA4L2Q9NRX3 87 aa11.56□□□□□ -0.56
HERPUD1-215ENST00000568676 A0A0A6YYH2 397 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 IGHV7-4-1A0A0J9YVY3 117 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 A6NJ64 397 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 MARCH11A6NNE9 402 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 CHEK1O14757 476 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 NUPL2O15504 423 aaKnown RBP11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 Q56UQ5 140 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 AADACL3Q5VUY0 350 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 LINC00336Q6ZUF6 198 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 GIMAP1Q8WWP7 306 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 OR10C1Q96KK4 312 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 TMEM56Q96MV1 263 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 RNF2Q99496 336 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 HRH4Q9H3N8 390 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 RHBDL2Q9NX52 303 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 FKBP11Q9NYL4 201 aa11.55□□□□□ -0.56
HERPUD1-215ENST00000568676 DNAH10Q8IVF4 4471 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 K7EIM0 57 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 DFFBO76075 338 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 CTSGP08311 255 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 TMEM187Q14656 261 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 ZNF773Q6PK81 442 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 ZNF818PQ6ZRF7 136 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 UBAC2Q8NBM4 344 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms