RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 CHRDL1Q9BU40 450 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 QTRT1Q9BXR0 403 aaKnown RBP8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 C21orf62Q9NYP8 219 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 SMPXQ9UHP9 88 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 IGHV4-4A0A075B6R2 117 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 RBFOX2O43251 390 aaKnown RBP eCLIP8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 FGF2P09038 288 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 HSMCR30P0CW71 290 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 TAS2R31P59538 309 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 THOC7Q6I9Y2 204 aaKnown RBP8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 SLC25A24Q6NUK1 477 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 CNIH2Q6PI25 160 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 HSD17B13Q7Z5P4 300 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 Q8NAQ8 132 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 CMTM3Q96MX0 182 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 GPHA2Q96T91 129 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 RHPN1-AS1Q9BWJ2 59 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 DCSTAMPQ9H295 470 aa8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 ELF5Q9UKW6 265 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-209ENST00000568569 DNAH17Q9UFH2 4485 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 IGKV3-7A0A075B6H7 116 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 TRAV10A0A0B4J240 114 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 TRAV3A0A0B4J244 114 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 IFITM5A6NNB3 132 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 C15orf61A6NNL5 157 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 F8W735 103 aaPredicted RBP8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 UPK2O00526 184 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 CHEK1O14757 476 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 TNFSF12O43508 249 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 SERPINE2P07093 398 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 OR13C7P0DN81 318 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 NQO2P16083 231 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 HLA-DMBP28068 263 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 OR10A3P58181 314 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 FABP5Q01469 135 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 POU2AF1Q16633 256 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 HACD4Q5VWC8 232 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 SPAG16Q8N0X2 631 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 CENPSQ8N2Z9 138 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 UBAC2Q8NBM4 344 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 TMEM116Q8NCL8 245 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 OR10W1Q8NGF6 305 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 SCARB1Q8WTV0 552 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 ACOT13Q9NPJ3 140 aa8.59□□□□□ -1.03
GTF3C1-209ENST00000568569 IGHV3-21A0A0B4J1V1 117 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 PDCD5O14737 125 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 RTL8CO15255 209 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 HPRT1P00492 218 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 TRAPPC2P0DI81 140 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 TRAPPC2BP0DI82 140 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 PAFAH1B2P68402 229 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 RELQ04864 619 aaPredicted RBP8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 WT1-ASQ06250 92 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 MLLT11Q13015 90 aaPredicted RBP8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 MSMO1Q15800 293 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 CDNFQ49AH0 187 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 Q56UQ5 140 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 PVRIGQ6DKI7 326 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 Q6ZTC4 211 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 OR10C1Q96KK4 312 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 RNF126Q9BV68 326 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 ATG5Q9H1Y0 275 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 TMEM140Q9NV12 185 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 SCN3BQ9NY72 215 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 ANXA10Q9UJ72 324 aa8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 F11RQ9Y624 299 aaKnown RBP8.58□□□□□ -1.04
GTF3C1-209ENST00000568569 IGHV3-49A0A0A0MS15 119 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 IGHV4-28A0A0C4DH34 117 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 K7EIM0 57 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 SULT1C2O00338 296 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 NUPL2O15504 423 aaKnown RBP8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 AMBPP02760 352 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 P0DMU3 169 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 CATR1Q13166 79 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 FAM90A2PQ658T7 463 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 GBGT1Q8N5D6 347 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 POM121L12Q8N7R1 296 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 ZBTB34Q8NCN2 500 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 DMBX1Q8NFW5 382 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 OR13F1Q8NGS4 319 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 NUDCD2Q8WVJ2 157 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 SECTM1Q8WVN6 248 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 HSPG2P98160 4391 aa8.57□□□□□ -1.04
GTF3C1-209ENST00000568569 TRAV14DV4A0A0A6YYC5 116 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 TRAV1-2A0A0B4J238 106 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 TMEM235A6NFC5 223 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 DFFBO76075 338 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 YIF1AO95070 293 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 CD5P06127 495 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 CTSGP08311 255 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 RBMY1A1P0DJD3 496 aaKnown RBP8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 RBMY1CP0DJD4 496 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 MIFP14174 115 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 MYL9P24844 172 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 GNG2P59768 71 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 RBMY1FQ15415 496 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms