RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 FAM96BQ9Y3D0 163 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 NAV2Q8IVL1 2488 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 ABCA2Q9BZC7 2435 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 IGHV4-61A0A0C4DH41 118 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 IGHV2-70DA0A0C4DH43 119 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 FAM157AC9JC47 383 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 E7EUB6 86 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 RNASEK-C17orf49H0YIS7 233 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 FOXH1O75593 365 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 EIF3GO75821 320 aaKnown RBP eCLIP5.7□□□□□ -1.5
SMG1-215ENST00000568239 LY86O95711 162 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 IGLV2-23P01705 113 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 CD1BP29016 333 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 SRSF3P84103 164 aaKnown RBP5.7□□□□□ -1.5
SMG1-215ENST00000568239 ATP6V1FQ16864 119 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 TPTE2P1Q5T6R2 138 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 ZNF709Q8N972 641 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 OR11H6Q8NGC7 330 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 OR1L8Q8NGR8 309 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 SFT2D1Q8WV19 159 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 VSIRQ9H7M9 311 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 METTL1Q9UBP6 276 aaKnown RBP5.7□□□□□ -1.5
SMG1-215ENST00000568239 ZNF257Q9Y2Q1 563 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 CELSR1Q9NYQ6 3014 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 CSPG4Q6UVK1 2322 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 A8MXK9 166 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 TRIM77I1YAP6 450 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 APOC3P02656 99 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 H2AFB1P0C5Y9 115 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 ERHP84090 104 aaKnown RBP5.69□□□□□ -1.5
SMG1-215ENST00000568239 MMDQ15546 238 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 TNXAQ16473 311 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 TUSC1Q2TAM9 212 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 DMRTA1Q5VZB9 504 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 BTNL8Q6UX41 500 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 BPIFCQ8NFQ6 507 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 TMEM170AQ8WVE7 144 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 EIF5A2Q9GZV4 153 aaKnown RBP5.69□□□□□ -1.5
SMG1-215ENST00000568239 KPTNQ9Y664 436 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 IGHV4-30-2A0A087WSY4 118 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 A0A1W2PPI3 338 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 RAB19A4D1S5 217 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 KRBOX1C9JBD0 128 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 IGKV1D-33P01593 117 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 IGKV1-33P01594 117 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 REG1AP05451 166 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 IL6RP08887 468 aaPredicted RBP5.69□□□□□ -1.5
SMG1-215ENST00000568239 PDLIM3Q53GG5 364 aaPredicted RBP5.69□□□□□ -1.5
SMG1-215ENST00000568239 ZNF787Q6DD87 383 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 HCP5Q6MZN7 132 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 IL34Q6ZMJ4 242 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 TMEM167AQ8TBQ9 72 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 FBXL15Q9H469 300 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 RPRMQ9NS64 109 aa5.69□□□□□ -1.5
SMG1-215ENST00000568239 IGHV3OR16-10A0A075B7F0 116 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 LY6LH3BQJ8 138 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 SCO1O75880 301 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 OR13C7P0DN81 318 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 HOXB4P17483 251 aaPredicted RBP5.68□□□□□ -1.5
SMG1-215ENST00000568239 DVL1P1P54792 670 aaPredicted RBP5.68□□□□□ -1.5
SMG1-215ENST00000568239 LCN15Q6UWW0 184 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 EIF4E3Q8N5X7 224 aaKnown RBP5.68□□□□□ -1.5
SMG1-215ENST00000568239 OR4A5Q8NH83 315 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 C10orf105Q8TEF2 133 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 MARVELD3Q96A59 401 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 J3KRW8 73 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 HMGB3O15347 200 aaKnown RBP5.68□□□□□ -1.5
SMG1-215ENST00000568239 ZP3P21754 424 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 DEFA5Q01523 94 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 PSG5Q15238 335 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 FFAR4Q5NUL3 377 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 CCDC28AQ8IWP9 274 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 KIR3DL3Q8N743 410 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 PSMG3Q9BT73 122 aaPredicted RBP5.68□□□□□ -1.5
SMG1-215ENST00000568239 NPCDR1Q9BY65 106 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 SIRPDQ9H106 197 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 NDUFA4L2Q9NRX3 87 aa5.68□□□□□ -1.5
SMG1-215ENST00000568239 A0A1W2PN81 502 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 NCBP2LA6PVI3 153 aaKnown RBP5.67□□□□□ -1.5
SMG1-215ENST00000568239 ODF3BA8MYP8 253 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 C17orf112F2Z3M2 114 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 VENTXO95231 258 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 CNIH1O95406 144 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 CHRNA7P36544 502 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 FGF8P55075 233 aaPredicted RBP5.67□□□□□ -1.5
SMG1-215ENST00000568239 RAB2AP61019 212 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 SERF2P84101 59 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 PAX2Q02962 417 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 TREML4Q6UXN2 200 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 PPP1R27Q86WC6 154 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 MMD2Q8IY49 270 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 SIGLEC9Q9Y336 463 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 HELZ2Q9BYK8 2649 aaKnown RBP5.67□□□□□ -1.5
SMG1-215ENST00000568239 FBN2P35556 2912 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 ZFHX3Q15911 3703 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 NUDT19A8MXV4 375 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 F8W036 122 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 NDUFS8O00217 210 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 SCAF4O95104 1147 aaKnown RBP5.67□□□□□ -1.5
SMG1-215ENST00000568239 IGHV3-48P01763 117 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms