RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NUP210Q8TEM1 1887 aaPredicted RBP9.13□□□□□ -0.95
PALB2-206ENST00000568219 ARFGEF3Q5TH69 2177 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 A0A1W2PS18 150 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 PPOXP50336 477 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 PRRX1P54821 245 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 LRRC29Q8WV35 223 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 POM121L2Q96KW2 1035 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 NABP2Q9BQ15 211 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 TMEM70Q9BUB7 260 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 PRDM14Q9GZV8 571 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 HSPB7Q9UBY9 170 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 COX11Q9Y6N1 276 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 SH2D7A6NKC9 451 aaPredicted RBP9.13□□□□□ -0.95
PALB2-206ENST00000568219 CELA3AP09093 270 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 ZNF83P51522 516 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 OR1C1Q15619 314 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 AARDQ4LEZ3 155 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 SLC25A53Q5H9E4 307 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 NUDT11Q96G61 164 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 ZC2HC1AQ96GY0 325 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 PCED1AQ9H1Q7 454 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 TCF19Q9Y242 345 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 A0A1W2PQM1 296 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 J3QR06 171 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 TYMSP04818 313 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 SMIM21Q3B7S5 101 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 Q6ZPA2 131 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 C1QTNF5Q9BXJ0 243 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 TMEM140Q9NV12 185 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 MRPS18CQ9Y3D5 142 aaKnown RBP9.13□□□□□ -0.95
PALB2-206ENST00000568219 HILPDAQ9Y5L2 63 aa9.13□□□□□ -0.95
PALB2-206ENST00000568219 TRAV9-2A0A087WT02 112 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 NKX6-3A6NJ46 265 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 LINC00869P0C866 280 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 CD24P25063 80 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 C12orf54Q6X4T0 127 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 OR2V2Q96R30 315 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 PHF7Q9BWX1 381 aaPredicted RBP9.12□□□□□ -0.95
PALB2-206ENST00000568219 CLEC1BQ9P126 229 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 TMSB15BA0A087X1C1 80 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 ZNF891A8MT65 544 aaPredicted RBP9.12□□□□□ -0.95
PALB2-206ENST00000568219 TDGF1P13385 188 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 RPL15P61313 204 aaKnown RBP9.12□□□□□ -0.95
PALB2-206ENST00000568219 EFNB3Q15768 340 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 CRIP3Q6Q6R5 217 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 TREML4Q6UXN2 200 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 TMEM116Q8NCL8 245 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 WDR83OSQ9Y284 106 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 AMMECR1Q9Y4X0 333 aaPredicted RBP9.12□□□□□ -0.95
PALB2-206ENST00000568219 CREBBPQ92793 2442 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 OR2T8A6NH00 312 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 SMPD2O60906 423 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 MPDU1O75352 247 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 OR9G9P0C7N8 305 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 NMUP48645 174 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 ZNF138P52744 262 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 TMEM42Q69YG0 159 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 TEX43Q6ZNM6 134 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 F11RQ9Y624 299 aaKnown RBP9.12□□□□□ -0.95
PALB2-206ENST00000568219 PRUNE2Q8WUY3 3088 aa9.12□□□□□ -0.95
PALB2-206ENST00000568219 A0A087X0K7 114 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 SPRY3O43610 288 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 CRYABP02511 175 aaKnown RBP9.11□□□□□ -0.95
PALB2-206ENST00000568219 REG1BP48304 166 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 ERHP84090 104 aaKnown RBP9.11□□□□□ -0.95
PALB2-206ENST00000568219 PCOLCEQ15113 449 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 DCAF12Q5T6F0 453 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 FADS6Q8N9I5 356 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 ORAOV1Q8WV07 137 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 TXNDC17Q9BRA2 123 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 A0A1W2PR77 199 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 SELENOVP59797 346 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 COX19Q49B96 90 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 TCF24Q7RTU0 167 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 ZBTB34Q8NCN2 500 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 OR1B1Q8NGR6 318 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 TMEM45BQ96B21 275 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 CDC42EP3Q9UKI2 254 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 RIF1Q5UIP0 2472 aaKnown RBP9.11□□□□□ -0.95
PALB2-206ENST00000568219 TRBV20OR9-2A0A075B6H5 130 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 MUC21A0A0G2JKD1 596 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 MUC21A0A140T8X8 626 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 PSPNO60542 156 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 P01737 135 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 COL8A1P27658 744 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 PDLIM4P50479 330 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 PLP1P60201 277 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 SELENOTP62341 195 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 SCGB2A2Q13296 93 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 PLGLAQ15195 96 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 MUC21Q5SSG8 566 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 RIPPLY2Q5TAB7 128 aa9.11□□□□□ -0.95
PALB2-206ENST00000568219 H1FXQ92522 213 aaKnown RBP9.11□□□□□ -0.95
PALB2-206ENST00000568219 TRAV3A0A0B4J244 114 aa9.1□□□□□ -0.95
PALB2-206ENST00000568219 ARL3P36405 182 aa9.1□□□□□ -0.95
PALB2-206ENST00000568219 OR13A1Q8NGR1 328 aa9.1□□□□□ -0.95
PALB2-206ENST00000568219 OR1L4Q8NGR5 311 aa9.1□□□□□ -0.95
PALB2-206ENST00000568219 TSKUQ8WUA8 353 aa9.1□□□□□ -0.95
PALB2-206ENST00000568219 TRIOO75962 3097 aa9.1□□□□□ -0.95
PALB2-206ENST00000568219 HIGD1CA8MV81 97 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms