RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MARCH11A6NNE9 402 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 PPP5D1E7EU14 171 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 GPR31O00270 319 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 RGS13O14921 159 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 HPGDSO60760 199 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 PGLYRP1O75594 196 aaPredicted RBP3.63□□□□□ -1.83
CLK3-219ENST00000567805 S1PR2O95136 353 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 GABARAPO95166 117 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 NDUFB8O95169 186 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 REG1AP05451 166 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 SERPINE2P07093 398 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 MYOD1P15172 320 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 ELK1P19419 428 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 HLA-DMAP28067 261 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 S100GP29377 79 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 RCVRNP35243 200 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 ARL3P36405 182 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 MECP2P51608 486 aaKnown RBP3.63□□□□□ -1.83
CLK3-219ENST00000567805 UCP3P55916 312 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 TSPAN5P62079 268 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 ID3Q02535 119 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 FAM106AQ4KMX7 169 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 MZT2AQ6P582 158 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 CLEC19AQ6UXS0 136 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 C19orf35Q6ZS72 473 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 GPHB5Q86YW7 130 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 LYSMD2Q8IV50 215 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 OR1L8Q8NGR8 309 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 DYNLRB2Q8TF09 96 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 CHAC2Q8WUX2 184 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 FCAMRQ8WWV6 532 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 AP3S1Q92572 193 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 DGCR14Q96DF8 476 aaKnown RBP3.63□□□□□ -1.83
CLK3-219ENST00000567805 CCDC140Q96MF4 163 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 TM2D3Q9BRN9 247 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 THAP7Q9BT49 309 aaPredicted RBP3.63□□□□□ -1.83
CLK3-219ENST00000567805 FXYD6Q9H0Q3 95 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 C19orf73Q9NVV2 129 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 FKBP11Q9NYL4 201 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 DMRT1Q9Y5R6 373 aa3.63□□□□□ -1.83
CLK3-219ENST00000567805 TRAV3A0A0B4J244 114 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 TEX50A0A1B0GTY4 177 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 IZUMO1RA6ND01 250 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 MFSD2BA6NFX1 497 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 A8MWP6 167 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 FAM25AB3EWG3 89 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 FAM25CB3EWG5 89 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 FAM25GB3EWG6 89 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 C3orf84H3BNL1 204 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 SNAPC5O75971 98 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 TPPPO94811 219 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 OR2C1O95371 312 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 KRASP01116 189 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 HLA-AP01891 365 aaKnown RBP3.62□□□□□ -1.83
CLK3-219ENST00000567805 CLEC3BP05452 202 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 TRAPPC2P0DI81 140 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 TRAPPC2BP0DI82 140 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 SMIM18P0DKX4 95 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 FOLR2P14207 255 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 RPA2P15927 270 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 ZNF182P17025 639 aaPredicted RBP3.62□□□□□ -1.83
CLK3-219ENST00000567805 TBPP20226 339 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 CBLN1P23435 193 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 PTBP1P26599 531 aaKnown RBP eCLIP3.62□□□□□ -1.83
CLK3-219ENST00000567805 G6PCP35575 357 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 LPAR6P43657 344 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 WT1-ASQ06250 92 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 CTF1Q16619 201 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 DEFB114Q30KQ6 69 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 CD300EQ496F6 205 aaPredicted RBP3.62□□□□□ -1.83
CLK3-219ENST00000567805 ZNF585BQ52M93 769 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 PHLDA2Q53GA4 152 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 GPR107Q5VW38 600 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 ADAMTSL5Q6ZMM2 481 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 TBC1D26Q86UD7 250 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 SNX29P2Q8IUI4 249 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 SLC38A6Q8IZM9 456 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 GDPD1Q8N9F7 314 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 OR10W1Q8NGF6 305 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 OR5B3Q8NH48 314 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 VN1R17PQ8TDU5 208 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 C15orf40Q8WUR7 153 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 LSM10Q969L4 123 aaKnown RBP3.62□□□□□ -1.83
CLK3-219ENST00000567805 TMEM56Q96MV1 263 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 TSC22D3Q99576 134 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 MRPS26Q9BYN8 205 aaKnown RBP3.62□□□□□ -1.83
CLK3-219ENST00000567805 TUBA4BQ9H853 241 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 PALMDQ9NP74 551 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 ZC4H2Q9NQZ6 224 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 NDUFA4L2Q9NRX3 87 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 SLC2A8Q9NY64 477 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 TECRQ9NZ01 308 aaKnown RBP3.62□□□□□ -1.83
CLK3-219ENST00000567805 PRNDQ9UKY0 176 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 OR51B2Q9Y5P1 312 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 NBEAL2Q6ZNJ1 2754 aa3.62□□□□□ -1.83
CLK3-219ENST00000567805 ZNF320A2RRD8 509 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 TMEM213A2RRL7 107 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 C15orf61A6NNL5 157 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 ZNF785A8K8V0 405 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms