RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 LMO4P61968 165 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 RPL23AP62750 156 aaKnown RBP4.6□□□□□ -1.67
SF3B3-210ENST00000567654 LCN2P80188 198 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 SPANXN5Q5MJ07 72 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 LHFPL4Q7Z7J7 247 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 PDZD9Q8IXQ8 264 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 PUSL1Q8N0Z8 303 aaKnown RBP4.6□□□□□ -1.67
SF3B3-210ENST00000567654 DYNAPQ8N1N2 210 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 UBAC2Q8NBM4 344 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 HSD17B11Q8NBQ5 300 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 OR1S2Q8NGQ3 325 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 OR13D1Q8NGV5 346 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 OR10X1Q8NGY0 326 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 CD300LFQ8TDQ1 290 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 DTD1Q8TEA8 209 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 PHYHIPLQ96FC7 376 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 ADTRPQ96IZ2 230 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 RAB40CQ96S21 281 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 CCL19Q99731 98 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 SLC25A32Q9H2D1 315 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 MMP26Q9NRE1 261 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.6□□□□□ -1.67
SF3B3-210ENST00000567654 PRELID3BQ9Y3B1 194 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 DMRT1Q9Y5R6 373 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 WSB1Q9Y6I7 421 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 TENM4Q6N022 2769 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 FAM208BQ5VWN6 2430 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 LOC105371242A0A075B767 164 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 IGHV4-30-2A0A087WSY4 118 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 IGHV4-61A0A0C4DH41 118 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 A0A1B0GW64 132 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 MFSD2BA6NFX1 497 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 FAM90A9PA6NNJ1 464 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 CEBPZOSA8MTT3 80 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 ODF3BA8MYP8 253 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 RNASEK-C17orf49H0YIS7 233 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 BUB1B-PAK6H3BSN5 160 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 UPK2O00526 184 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 TRIAP1O43715 76 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 JTBO76095 146 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 RBP4P02753 201 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 OPN1MWP04001 364 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 OPN1MW2P0DN77 364 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 OPN1MW3P0DN78 364 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 SPP1P10451 314 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 ATP6V0CP27449 155 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 FHITP49789 147 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 SULT1A1P50225 295 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 SULT1A2P50226 295 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 TAS2R30P59541 319 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 ERVK-16P61578 105 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 PDLIM3Q53GG5 364 aaPredicted RBP4.59□□□□□ -1.67
SF3B3-210ENST00000567654 C10orf55Q5SWW7 151 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 FAM71F2Q6NXP2 309 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM182Q6ZP80 229 aaPredicted RBP4.59□□□□□ -1.67
SF3B3-210ENST00000567654 VMO1Q7Z5L0 202 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 TGIF2LXQ8IUE1 241 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 STPG2Q8N412 459 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 OR4A16Q8NH70 328 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 C17orf50Q8WW18 174 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 TNFRSF14Q92956 283 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM186Q96B77 213 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 HARBI1Q96MB7 349 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 TBX15Q96SF7 602 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 ATP5SQ99766 215 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 CLEC7AQ9BXN2 247 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 SLC25A31Q9H0C2 315 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 SIRPDQ9H106 197 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM14BQ9NUH8 114 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 MED9Q9NWA0 146 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 TCF19Q9Y242 345 aa4.59□□□□□ -1.67
SF3B3-210ENST00000567654 FOXA2Q9Y261 457 aaPredicted RBP4.59□□□□□ -1.67
SF3B3-210ENST00000567654 SPG11Q96JI7 2443 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 PIGBOS1A0A0B4J2F0 54 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 IGHV1-3A0A0C4DH29 117 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 IGHV2-70DA0A0C4DH43 119 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 TEX50A0A1B0GTY4 177 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 UBE2L5PA0A1B0GUS4 154 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 A8MXK9 166 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 PRSS46E5RG02 174 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 H7C2Y5 167 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 M0R1W7 72 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 RRHO14718 337 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 RBMXL2O75526 392 aaKnown RBP4.58□□□□□ -1.68
SF3B3-210ENST00000567654 MED6O75586 246 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 EIF3GO75821 320 aaKnown RBP eCLIP4.58□□□□□ -1.68
SF3B3-210ENST00000567654 ATG12O94817 140 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 KBTBD11O94819 623 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 GOSR1O95249 250 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 IFNA17P01571 189 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 APOA2P02652 100 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 CRYGBP07316 175 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 FGF2P09038 288 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 PDLIM4P50479 330 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 SPCS3P61009 180 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 RAB14P61106 215 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 SSBP2P81877 361 aaPredicted RBP4.58□□□□□ -1.68
SF3B3-210ENST00000567654 BAXQ07812 192 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 SLC38A11Q08AI6 406 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 PJVKQ0ZLH3 352 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms