RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	IL34	Q6ZMJ4	242 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	ZNF818P	Q6ZRF7	136 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	SSX9	Q7RTT3	188 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	TMEM17	Q86X19	198 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	LYSMD2	Q8IV50	215 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	OR9G4	Q8NGQ1	327 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	OR5H2	Q8NGV7	314 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	OR6F1	Q8NGZ6	308 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	ASCL2	Q99929	193 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	RSRP1	Q9BUV0	290 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	SRR	Q9GZT4	340 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	HRASLS	Q9HDD0	168 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	BET1L	Q9NYM9	111 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	FBXL7	Q9UJT9	491 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	ANAPC10	Q9UM13	185 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	ZNF257	Q9Y2Q1	563 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635		U3KQK5	164 aa		5.29	□□□□□ -1.56
SF3B3-209	ENST00000567635	STAB2	Q8WWQ8	2551 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	NPIPB5	A8MRT5	1133 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635		E7EUB6	86 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635		H0Y980	276 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	UPK2	O00526	184 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	PGLYRP1	O75594	196 aa	Predicted RBP	5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	OR2J3	O76001	311 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	DHFR	P00374	187 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	CRYGC	P07315	174 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	CSN3	P07498	182 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	IL7	P13232	177 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	NQO2	P16083	231 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	HLA-G	P17693	338 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	PSMB6	P28072	239 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	HTR2B	P41595	481 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	TAS2R31	P59538	309 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	EXOSC2	Q13868	293 aa	Known RBP	5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	POU2AF1	Q16633	256 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	C15orf32	Q32M92	178 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	PYDC2	Q56P42	97 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	AADACL3	Q5VUY0	350 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	LPCAT3	Q6P1A2	487 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	SNX29P2	Q8IUI4	249 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	CMTM1	Q8IZ96	169 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	OR51H1	Q8NH63	302 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	GPX8	Q8TED1	209 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	MOB3A	Q96BX8	217 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	WWC2-AS2	Q96NR7	200 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	PLEKHA2	Q9HB19	425 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	SIGLEC8	Q9NYZ4	499 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	PEMT	Q9UBM1	199 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	EXTL2	Q9UBQ6	330 aa		5.28	□□□□□ -1.56
SF3B3-209	ENST00000567635	TRAV3	A0A0B4J244	114 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635		A0A1B0GW64	132 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	CGB1	A6NKQ9	187 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	BMPR1B	O00238	502 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	GPR31	O00270	319 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	NDUFB8	O95169	186 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	FGF2	P09038	288 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	DEFA4	P12838	97 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	MYOD1	P15172	320 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	AREG	P15514	252 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	HIST1H1B	P16401	226 aa	Known RBP	5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	ATF4	P18848	351 aa	Predicted RBP	5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	F2R	P25116	425 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	HLA-DMA	P28067	261 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	S100G	P29377	79 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	HRH1	P35367	487 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	LPAR6	P43657	344 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	MECP2	P51608	486 aa	Known RBP	5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR2B8P	P59922	312 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	ERVK-16	P61578	105 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	TSPAN5	P62079	268 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	IL18	Q14116	193 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	BAK1	Q16611	211 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	KLK9	Q2XQG4	91 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	NOXA1	Q86UR1	476 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	HAPLN4	Q86UW8	402 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	SBSPON	Q8IVN8	264 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635		Q8N1Y9	231 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	DMBX1	Q8NFW5	382 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	C15orf40	Q8WUR7	153 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	FANCD2OS	Q96PS1	177 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	CITED4	Q96RK1	184 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	ABHD1	Q96SE0	405 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	SRSF8	Q9BRL6	282 aa	Known RBP	5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	COMMD5	Q9GZQ3	224 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	COMMD9	Q9P000	198 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	KLK9	Q9UKQ9	250 aa		5.27	□□□□□ -1.57
SF3B3-209	ENST00000567635	TRBV7-1	A0A0A6YYK4	115 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	TEX50	A0A1B0GTY4	177 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	PPP5D1	E7EU14	171 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	CTDSPL	O15194	276 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	GGCT	O75223	188 aa	Known RBP	5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	SNAPC5	O75971	98 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	S1PR2	O95136	353 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR2C1	O95371	312 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	RLN1	P04808	185 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	REG1A	P05451	166 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	FRMD6-AS1	P0C7T7	363 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	RPA2	P15927	270 aa		5.26	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 119 ms