RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 HAVCR2Q8TDQ0 301 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 IFT81Q8WYA0 676 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ANKRD7Q92527 254 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 RORBQ92753 470 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 BORCS5Q969J3 196 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 PPWD1Q96BP3 646 aaKnown RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 C12orf43Q96C57 262 aaKnown RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 MS4A6EQ96DS6 147 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 GNPNAT1Q96EK6 184 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 LINC00526Q96FQ7 95 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ANKRD36BP1Q96IX9 119 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 PRRT1Q99946 306 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 TIPINQ9BVW5 301 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 UGT2B28Q9BY64 529 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 YIPF3Q9GZM5 350 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 DERL2Q9GZP9 239 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 TLNRD1Q9H1K6 362 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 MS4A6AQ9H2W1 248 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 UCK1Q9HA47 277 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ASCL3Q9NQ33 180 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 NIT2Q9NQR4 276 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 PARVAQ9NVD7 372 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CMTM6Q9NX76 183 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 PAQR5Q9NXK6 330 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 UBAP1Q9NZ09 502 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 IL36BQ9NZH7 164 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 OR5AC2Q9NZP5 309 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 RABL2AQ9UBK7 228 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CD300AQ9UGN4 299 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 KLK9Q9UKQ9 250 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 TP53TG1Q9Y2A0 90 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 BZW2Q9Y6E2 419 aaKnown RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CECR2Q9BXF3 1484 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SIP14410 1827 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ECM29Q5VYK3 1845 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CTTNBP2Q8WZ74 1663 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 ARHGEF11O15085 1522 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 SBF1O95248 1867 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 COL24A1Q17RW2 1714 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 MACF1Q9UPN3 7388 aaKnown RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 TRAV8-1A0A0A6YYK1 113 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 TRAV12-1A0A0B4J245 112 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 C1orf232A0A0U1RR37 186 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 TINCRA0A1B0GVN0 87 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 TRBV6-4A0A1B0GX49 114 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 GOLGA8IPA6NC78 632 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 SMIM9A6NGZ8 99 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 OR4C45A6NMZ5 311 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 EVPLLA8MZ36 301 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 FTCDNL1E5RQL4 147 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 F5H768 121 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 BIRC5O15392 142 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 UGT2B11O75310 529 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 HYPMO75409 117 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 ATP6V1G2O95670 118 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 ZNF682O95780 498 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 CD14P08571 375 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 LINC00614P0C842 121 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 MGST1P10620 155 aaKnown RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 MIFP14174 115 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 SYT1P21579 422 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 S100A7P31151 101 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 CD79BP40259 229 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 CSN1S1P47710 185 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 RAB13P51153 203 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 EMP1P54849 157 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 FOXA3P55318 350 aaPredicted RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 CARD18P57730 90 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 OR4D2P58180 307 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 FXYD7P58549 80 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 RAB8AP61006 207 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H4AP62805 103 aaKnown RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 PSG9Q00887 426 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 AKR1C1Q04828 323 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 CDK10Q15131 360 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 VAMP3Q15836 100 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 MPV17LQ2QL34 196 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 SPINK9Q5DT21 86 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 C1orf137Q5JT78 98 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 IBA57Q5T440 356 aaKnown RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 AADACL3Q5VUY0 350 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 LPCAT4Q643R3 524 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 GLIPR1L1Q6UWM5 242 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 SPINK6Q6UWN8 80 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 LINC00575Q6W349 94 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 LINC00322Q6ZN03 302 aaPredicted RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 BPIFA4PQ86YQ2 179 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 CLVS1Q8IUQ0 354 aaPredicted RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 Q8IYB0 196 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 CLECL1Q8IZS7 167 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 TMEM156Q8N614 296 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 OR7G1Q8NGA0 311 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 OR51D1Q8NGF3 324 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 Q8TAT8 98 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 STOML3Q8TAV4 291 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 TMEM239Q8WW34 195 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 RASSF5Q8WWW0 418 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 PATE1Q8WXA2 126 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms