RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 DNAJC9-AS1A6NH13 148 aa10.09□□□□□ -0.79
SF3B3-206ENST00000565990 LINC00473A8K010 186 aa10.09□□□□□ -0.79
SF3B3-206ENST00000565990 H0YJW9 148 aa10.09□□□□□ -0.79
SF3B3-206ENST00000565990 VENTXO95231 258 aa10.09□□□□□ -0.79
SF3B3-206ENST00000565990 SFTA3P0C7M3 94 aa10.09□□□□□ -0.79
SF3B3-206ENST00000565990 VDAC1P21796 283 aa10.09□□□□□ -0.79
SF3B3-206ENST00000565990 RPL30P62888 115 aaKnown RBP10.09□□□□□ -0.79
SF3B3-206ENST00000565990 GNPNAT1Q96EK6 184 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-206ENST00000565990 EAF1Q96JC9 268 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-206ENST00000565990 CACFD1Q9UGQ2 172 aa10.09□□□□□ -0.79
SF3B3-206ENST00000565990 TCF19Q9Y242 345 aa10.09□□□□□ -0.79
SF3B3-206ENST00000565990 H0Y980 276 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 NDUFS6O75380 124 aaKnown RBP10.08□□□□□ -0.8
SF3B3-206ENST00000565990 MOSP00540 346 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 RNASE1P07998 156 aaKnown RBP10.08□□□□□ -0.8
SF3B3-206ENST00000565990 SNRNP70P08621 437 aaKnown RBP10.08□□□□□ -0.8
SF3B3-206ENST00000565990 CD24P25063 80 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 NKX2-1P43699 371 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-206ENST00000565990 RHEBQ15382 184 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 PRIMA1Q86XR5 153 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 FAM219AQ8IW50 185 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 IQCF2Q8IXL9 164 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 CMTM1Q8IZ96 169 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 LINC00518Q8N0U6 118 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 OR2C3Q8N628 320 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 OR2T10Q8NGZ9 312 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 RBM14Q96PK6 669 aaKnown RBP10.08□□□□□ -0.8
SF3B3-206ENST00000565990 PRR13Q9NZ81 148 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 VPREB3Q9UKI3 123 aa10.08□□□□□ -0.8
SF3B3-206ENST00000565990 IGHV3-72A0A0B4J1Y9 119 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 NUPL2O15504 423 aaKnown RBP10.07□□□□□ -0.8
SF3B3-206ENST00000565990 DFFBO76075 338 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 IGKV1D-33P01593 117 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 IGKV1-33P01594 117 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 HBE1P02100 147 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 MAS1LP35410 378 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 NPBWR1P48145 328 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 CAMLGP49069 296 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 RAB5BP61020 215 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 RPL15P61313 204 aaKnown RBP10.07□□□□□ -0.8
SF3B3-206ENST00000565990 S100A12P80511 92 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 GUK1Q16774 197 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 FBLN7Q53RD9 439 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 C16orf82Q7Z2V1 217 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 LYZL2Q7Z4W2 148 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 PDPNQ86YL7 162 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 ZNF695Q8IW36 515 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 RITA1Q96K30 269 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 LYRM2Q9NU23 88 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-206ENST00000565990 PITPNC1Q9UKF7 332 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 RCL1Q9Y2P8 373 aaKnown RBP10.07□□□□□ -0.8
SF3B3-206ENST00000565990 WASHC3Q9Y3C0 194 aa10.07□□□□□ -0.8
SF3B3-206ENST00000565990 A0A1B0GU03 582 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 RBFOX2O43251 390 aaKnown RBP eCLIP10.06□□□□□ -0.8
SF3B3-206ENST00000565990 KCNAB3O43448 404 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 SCGB1D2O95969 90 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 MT-ND4LP03901 98 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 IGKV1-16P04430 117 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 F2RP25116 425 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 RAB2AP61019 212 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 EWSR1Q01844 656 aaKnown RBP eCLIP10.06□□□□□ -0.8
SF3B3-206ENST00000565990 ID3Q02535 119 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 TMEM177Q53S58 311 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 NMSQ5H8A3 153 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 SELENOHQ8IZQ5 122 aaKnown RBP10.06□□□□□ -0.8
SF3B3-206ENST00000565990 TCTEX1D1Q8N7M0 179 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 SLC35G3Q8N808 338 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 NPBQ8NG41 125 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 LSM10Q969L4 123 aaKnown RBP10.06□□□□□ -0.8
SF3B3-206ENST00000565990 RBMXL1Q96E39 390 aaKnown RBP10.06□□□□□ -0.8
SF3B3-206ENST00000565990 GPHA2Q96T91 129 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 SCRT1Q9BWW7 348 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 SLC35D1Q9NTN3 355 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 MMP24Q9Y5R2 645 aa10.06□□□□□ -0.8
SF3B3-206ENST00000565990 TNFSF12O43508 249 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 SCAF4O95104 1147 aaKnown RBP10.05□□□□□ -0.8
SF3B3-206ENST00000565990 AMY1AP04745 511 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 OR8U8P0C7N1 319 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 TMEM11P17152 192 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 LGALS7P47929 136 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 VAMP2P63027 116 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 SRSF3P84103 164 aaKnown RBP10.05□□□□□ -0.8
SF3B3-206ENST00000565990 HNF4GQ14541 408 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 LY6EQ16553 131 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 PHLDA2Q53GA4 152 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 TBC1D26Q86UD7 250 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 FOXRED2Q8IWF2 684 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 FLYWCH2Q96CP2 140 aaKnown RBP10.05□□□□□ -0.8
SF3B3-206ENST00000565990 DUX5Q96PT3 197 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 RAB40CQ96S21 281 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 TP53RKQ96S44 253 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 PARD6GQ9BYG4 376 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-206ENST00000565990 SLC35B3Q9H1N7 401 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 KIAA1456Q9P272 454 aa10.05□□□□□ -0.8
SF3B3-206ENST00000565990 TRAV1-1A0A0B4J248 108 aa10.04□□□□□ -0.8
SF3B3-206ENST00000565990 SRRM4A7MD48 611 aaKnown RBP10.04□□□□□ -0.8
SF3B3-206ENST00000565990 COLCA2A8K830 154 aa10.04□□□□□ -0.8
SF3B3-206ENST00000565990 RNF212BA8MTL3 300 aa10.04□□□□□ -0.8
SF3B3-206ENST00000565990 CHST1O43916 411 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms