RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 MS4A10Q96PG2 267 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 NDUFA4L2Q9NRX3 87 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 KLK9Q9UKQ9 250 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 WNK1Q9H4A3 2382 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 TRBV9A0A0B4J1U6 114 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 TRAV3A0A0B4J244 114 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 DUXBA0A1W2PPF3 345 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 C15orf61A6NNL5 157 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 I3L521 148 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 LYRM1O43325 122 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 DUS4LO95620 317 aaKnown RBP9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 DEFA4P12838 97 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 CTRB1P17538 263 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 HSPE1P61604 102 aaKnown RBP9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 TMEM187Q14656 261 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 CTRB2Q6GPI1 263 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 LCNL1Q6ZST4 164 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 SELENOHQ8IZQ5 122 aaKnown RBP9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 DPF1Q92782 380 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 PDCD10Q9BUL8 212 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 MCRIP2Q9BUT9 160 aaKnown RBP9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 GPR61Q9BZJ8 451 aa9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.79□□□□□ -0.84
SHCBP1-204ENST00000565887 PKD1L1Q8TDX9 2849 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 A0A0B4J2A0 478 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 LINC00854A0A1B0GVQ3 168 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 HMX3A6NHT5 357 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 E7EUB6 86 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 PLA2G10O15496 165 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 IGKV1-5P01602 117 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 HSPB1P04792 205 aaKnown RBP9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 LGALS1P09382 135 aaKnown RBP9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 OR8U8P0C7N1 319 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 P0C879 139 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 CD33P20138 364 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 CCR6P51684 374 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 ERHP84090 104 aaKnown RBP9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 ATP5G2Q06055 141 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 ZNF616Q08AN1 781 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 C10orf55Q5SWW7 151 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 TMEM268Q5VZI3 342 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 C8orf86Q6ZUL3 223 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 LRTM2Q8N967 370 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 OR1N2Q8NGR9 330 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 TMEM230Q96A57 120 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 P2RX4Q99571 388 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 ALX4Q9H161 411 aaPredicted RBP9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 RANGRFQ9HD47 186 aaPredicted RBP9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 SHPKQ9UHJ6 478 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 NSG2Q9Y328 171 aa9.78□□□□□ -0.84
SHCBP1-204ENST00000565887 A0A0B4J293 547 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 INS-IGF2F8WCM5 200 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 SFT2D2O95562 160 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 APELAP0DMC3 54 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 OR13C7P0DN81 318 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 VAMP1P23763 118 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 MECP2P51608 486 aaKnown RBP9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 SUPT4H1P63272 117 aaKnown RBP9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 PRCDQ00LT1 54 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 OR11H1Q8NG94 326 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 OR52E5Q8NH55 327 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 RCC1LQ96I51 464 aaKnown RBP9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 RAX2Q96IS3 184 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 CXorf58Q96LI9 332 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 HINT2Q9BX68 163 aa9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 ZMAT5Q9UDW3 170 aaKnown RBP9.77□□□□□ -0.85
SHCBP1-204ENST00000565887 VWFP04275 2813 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 A0A1B0GW64 132 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 IGLC7A0M8Q6 106 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 CGB1A6NKQ9 187 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 UPK1BO75841 260 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 IFNA17P01571 189 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 AREGP15514 252 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 ZP3P21754 424 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 SUB1P53999 127 aaKnown RBP eCLIP9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 SPCS3P61009 180 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 RHOGP84095 191 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 ASAH1Q13510 395 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 AARDQ4LEZ3 155 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 HIST2H2BDQ6DRA6 164 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 ZNF343Q6P1L6 599 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 GNB4Q9HAV0 340 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 PLEKHA3Q9HB20 300 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 ENY2Q9NPA8 101 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 FBXL7Q9UJT9 491 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 MGAM2Q2M2H8 2515 aa9.76□□□□□ -0.85
SHCBP1-204ENST00000565887 TRRAPQ9Y4A5 3859 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 TRBV7-1A0A0A6YYK4 115 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 A0A1B0GU03 582 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 FAM240BA0A1B0GVZ2 78 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 LINC01619G3V211 115 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 TCRBP04435 133 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 SULT1A3P0DMM9 295 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 SULT1A4P0DMN0 295 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 SLC25A6P12236 298 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 MYOD1P15172 320 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 BTCP35070 178 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 SNCAP37840 140 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 DEFA1P59665 94 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 DEFA3P59666 94 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms