RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ETV7Q9Y603 341 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 A0A0A6YYH2 397 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 TRAV25A0A0B4J276 109 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 IGHV3-35A0A0C4DH35 117 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 TEX50A0A1B0GTY4 177 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 CCDC160A6NGH7 325 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 A6NJ64 397 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 F8W735 103 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-213ENST00000565173 FCER2P06734 321 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 NQO2P16083 231 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 GNRHRP30968 328 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 GPR183P32249 361 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 MFAP2P55001 183 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 WT1-ASQ06250 92 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 ANKRD55Q3KP44 614 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 VN1R17PQ8TDU5 208 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 RAB2BQ8WUD1 216 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 MARC2Q969Z3 335 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 SLC25A46Q96AG3 418 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 ZNF414Q96IQ9 312 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 QTRT1Q9BXR0 403 aaKnown RBP6.38□□□□□ -1.39
CAPN3-213ENST00000565173 C5orf66Q9H5L9 145 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 AUNIPQ9H7T9 357 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 PLEKHA2Q9HB19 425 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 TMEM140Q9NV12 185 aa6.38□□□□□ -1.39
CAPN3-213ENST00000565173 TMEM127O75204 238 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 S1PR2O95136 353 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 SERPINE2P07093 398 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 RORCP51449 518 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 TMBIM6P55061 237 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 FXYD4P59646 89 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 PLET1Q6UQ28 207 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 DHRS11Q6UWP2 260 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 RBPMS2Q6ZRY4 209 aaKnown RBP6.37□□□□□ -1.39
CAPN3-213ENST00000565173 CADM3Q8N126 398 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 OR2C3Q8N628 320 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 OR5AP2Q8NGF4 316 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 OR1L6Q8NGR2 347 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 OR51H1Q8NH63 302 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 TMEM190Q8WZ59 177 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 SPAG8Q99932 426 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-213ENST00000565173 BCL7BQ9BQE9 202 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 COMMD5Q9GZQ3 224 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 NDUFA4L2Q9NRX3 87 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 THYN1Q9P016 225 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 UFC1Q9Y3C8 167 aa6.37□□□□□ -1.39
CAPN3-213ENST00000565173 A0A0J9YWU9 116 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 MEIS3P1A6NDR6 274 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 OR2T8A6NH00 312 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 H3BMQ9 156 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 TSPAN4O14817 238 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 TGOLN2O43493 480 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 PGLYRP1O75594 196 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-213ENST00000565173 TRAPPC2P0DI81 140 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 TRAPPC2BP0DI82 140 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 OR13C7P0DN81 318 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 RPA2P15927 270 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 RFX2P48378 723 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 TNFRSF9Q07011 255 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 CATR1Q13166 79 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 SPCS2Q15005 226 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 ODF3L2Q3SX64 289 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 Q6ZWC4 215 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 TMEM17Q86X19 198 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 SAMD12Q8N8I0 201 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 GDPD1Q8N9F7 314 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 DMBX1Q8NFW5 382 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 CD300LFQ8TDQ1 290 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 SCARB1Q8WTV0 552 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 LINC00476Q8WZB0 136 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 AP3S1Q92572 193 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 BSCL2Q96G97 398 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-213ENST00000565173 CHRDL1Q9BU40 450 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 DIABLOQ9NR28 239 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 COMMD9Q9P000 198 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 COMMD3Q9UBI1 195 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 UBQLN2Q9UHD9 624 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 ANAPC10Q9UM13 185 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 TP53TG1Q9Y2A0 90 aa6.36□□□□□ -1.39
CAPN3-213ENST00000565173 MARCH11A6NNE9 402 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 K7EIM0 57 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 K7EMT4 169 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 NDUFA4O00483 81 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 XRCC3O43542 346 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 SPRY2O43597 315 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 ZNF182P17025 639 aaPredicted RBP6.35□□□□□ -1.39
CAPN3-213ENST00000565173 NAT1P18440 290 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 F2RP25116 425 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 BMI1P35226 326 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 ADMP35318 185 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 CBX5P45973 191 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 UBE2NLQ5JXB2 153 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 AADACL3Q5VUY0 350 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 THOC7Q6I9Y2 204 aaKnown RBP6.35□□□□□ -1.39
CAPN3-213ENST00000565173 SLC25A24Q6NUK1 477 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 MZT2AQ6P582 158 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 SPSB3Q6PJ21 355 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 HSD17B13Q7Z5P4 300 aaPredicted RBP6.35□□□□□ -1.39
CAPN3-213ENST00000565173 LYG2Q86SG7 212 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms