RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 CHST5Q9GZS9 411 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 AICDAQ9GZX7 198 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 DRC3Q9H069 523 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 ALX4Q9H161 411 aaPredicted RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 ZNHIT6Q9NWK9 470 aaKnown RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 TAS2R9Q9NYW1 312 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 WASHC3Q9Y3C0 194 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 SPTA1P02549 2419 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 HELZP42694 1942 aaKnown RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 ASH1LQ9NR48 2969 aaKnown RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 PRRC2CQ9Y520 2896 aaKnown RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 TENM1Q9UKZ4 2725 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 TEP1Q99973 2627 aaKnown RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 COL6A6A6NMZ7 2263 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 RYR3Q15413 4870 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 BOD1L1Q8NFC6 3051 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 C1orf232A0A0U1RR37 186 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 SPTY2D1-AS1A0A0U1RR47 76 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 METTL15A6NJ78 407 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 SIGLEC16A6NMB1 481 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 F5H5K5 113 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 TOX3O15405 576 aaPredicted RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 SLC25A20O43772 301 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 STX10O60499 249 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 ARL6IP5O75915 188 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 TNFSF15O95150 251 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 TNFP01375 233 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 PIRTP0C851 137 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 PSKH1P11801 424 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 UCHL3P15374 230 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 CRATP43155 626 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 INPP1P49441 399 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 CDK9P50750 372 aaKnown RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 STC1P52823 247 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 CLDN12P56749 244 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 MAXP61244 160 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 GNA12Q03113 381 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 BSPH1Q075Z2 132 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 PDK2Q15119 407 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 MMDQ15546 238 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 EXOC3L4Q17RC7 722 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 TRMT12Q53H54 448 aaKnown RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 HENMT1Q5T8I9 393 aaKnown RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 EBLN2Q6P2I7 272 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 SPATA24Q86W54 205 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 OTUD6BQ8N6M0 293 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 TMEM35BQ8NCS4 154 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 OR4C6Q8NH72 309 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 FAM172AQ8WUF8 416 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 RBP7Q96R05 134 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 B9D2Q9BPU9 175 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 FAM96AQ9H5X1 160 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 GLS2Q9UI32 602 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 RPUSD1Q9UJJ7 312 aaKnown RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 VPREB3Q9UKI3 123 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.26□□□□□ -2.21
PALB2-203ENST00000565038 LINC00588Q9Y4M8 146 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 CITO14578 2027 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 TLN1Q9Y490 2541 aaKnown RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 ZNF469Q96JG9 3925 aaPredicted RBP1.26□□□□□ -2.21
PALB2-203ENST00000565038 PTPN13Q12923 2485 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 COL4A2P08572 1712 aa1.26□□□□□ -2.21
PALB2-203ENST00000565038 PI4KAP42356 2102 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ITPR2Q14571 2701 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 USP9YO00507 2555 aaPredicted RBP1.25□□□□□ -2.21
PALB2-203ENST00000565038 POLQO75417 2590 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 SETD2Q9BYW2 2564 aaPredicted RBP1.25□□□□□ -2.21
PALB2-203ENST00000565038 MYH11P35749 1972 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 MAP1AP78559 2803 aaPredicted RBP1.25□□□□□ -2.21
PALB2-203ENST00000565038 IGKV1-12A0A0C4DH73 117 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 FABP12A6NFH5 140 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 GOLGA6L10A6NI86 522 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 A8MWP6 167 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 FTCDNL1E5RQL4 147 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 TMEM250H0YL14 139 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 LY6LH3BQJ8 138 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 CCL22O00626 93 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ZW10O43264 779 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ATP8B1O43520 1251 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 SOX14O95416 240 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 SOD1P00441 154 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 LTAP01374 205 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 IGKV1D-12P01611 117 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 APOEP02649 317 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ORM1P02763 201 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 OR4A8P0C604 315 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 CTSEP14091 401 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 BLVRBP30043 206 aaPredicted RBP1.25□□□□□ -2.21
PALB2-203ENST00000565038 MIPP30301 263 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 FAM3AP98173 230 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 COTL1Q14019 142 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 HES1Q14469 280 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 DEFB109BQ30KR1 87 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 SPIN4Q56A73 249 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ACSBG2Q5FVE4 666 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 FAM45BPQ6NSW5 357 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 C22orf39Q6P5X5 142 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ZNF767PQ75MW2 155 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 VN1R4Q7Z5H5 301 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 MTERF4Q7Z6M4 381 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms