RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SERTAD4Q9NUC0 356 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 CDC42EP3Q9UKI2 254 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 NBASA2RRP1 2371 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 MUC21A0A0G2JKD1 596 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 MUC21A0A140T8X8 626 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 TFF1P04155 84 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 CA7P43166 264 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 MUC21Q5SSG8 566 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 ZNF439Q8NDP4 499 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A10PA6NDY2 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A18PA6NE21 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A16PA6NEW6 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A20PA6NIJ5 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A8PA6NJQ4 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A7PA6NKC0 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A22PA8MWA6 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A12PA8MX19 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A5PA8MXJ8 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A23PA8MXZ1 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 NKX2-8O15522 239 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A15PP0C7V4 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A13PP0C7W8 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A14PP0C7W9 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A24PP0C7X0 464 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 CEBPDP49716 269 aaPredicted RBP13.5□□□□□ -0.25
LINC00554-201ENST00000564841 ZNF841Q6ZN19 808 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 TUSC5Q8IXB3 177 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 SARAFQ96BY9 339 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 ACTL6BO94805 426 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 CGAP01215 116 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 SSTR5P35346 364 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 ARG2P78540 354 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FOXE3Q13461 319 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 FAM168AQ92567 244 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 C12orf49Q9H741 205 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 TECRQ9NZ01 308 aaKnown RBP13.5□□□□□ -0.25
LINC00554-201ENST00000564841 BOKQ9UMX3 212 aaPredicted RBP13.5□□□□□ -0.25
LINC00554-201ENST00000564841 SPTA1P02549 2419 aa13.5□□□□□ -0.25
LINC00554-201ENST00000564841 hDV102S1A0JD36 115 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 CCL11P51671 97 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 KRTAP27-1Q3LI81 207 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 ZNF718Q3SXZ3 478 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 CENPWQ5EE01 88 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 OR2D3Q8NGH3 330 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 MEGF9Q9H1U4 602 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 ANKRD11Q6UB99 2663 aaPredicted RBP13.49□□□□□ -0.25
LINC00554-201ENST00000564841 TRAV9-2A0A087WT02 112 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 GJE1A6NN92 205 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 STAG3L2P0CL84 134 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 STAG3L3P0CL85 134 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 CRYBB3P26998 211 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 CEACAM21Q3KPI0 293 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 MRPL21Q7Z2W9 205 aaKnown RBP13.49□□□□□ -0.25
LINC00554-201ENST00000564841 MGST2Q99735 147 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 CLCF1Q9UBD9 225 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 WDR83OSQ9Y284 106 aa13.49□□□□□ -0.25
LINC00554-201ENST00000564841 AHRRA9YTQ3 701 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 FTH1P19P0C7X4 201 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 CD24P25063 80 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 CX3CL1P78423 397 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 OR52L2PQ8NGH6 319 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 MS4A5Q9H3V2 200 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 FAM90A26D6RGX4 464 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 MRPL33O75394 65 aaKnown RBP13.48□□□□□ -0.25
LINC00554-201ENST00000564841 PDLIM3Q53GG5 364 aaPredicted RBP13.48□□□□□ -0.25
LINC00554-201ENST00000564841 OR10J3Q5JRS4 329 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 TREML4Q6UXN2 200 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 LINC00173Q6ZV60 143 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 VKORC1L1Q8N0U8 176 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 SLC24A4Q8NFF2 622 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 C18orf32Q8TCD1 76 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 SSBP4Q9BWG4 385 aaPredicted RBP13.48□□□□□ -0.25
LINC00554-201ENST00000564841 ABI3Q9P2A4 366 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 RPL8P62917 257 aaKnown RBP13.48□□□□□ -0.25
LINC00554-201ENST00000564841 C1QTNF5Q9BXJ0 243 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 TTTY12Q9BZ98 90 aa13.48□□□□□ -0.25
LINC00554-201ENST00000564841 FAM181BA6NEQ2 426 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 DEFB108AA8MXU0 73 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 M0R2Z0 102 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 MGST1P10620 155 aaKnown RBP13.47□□□□□ -0.25
LINC00554-201ENST00000564841 GCHFRP30047 84 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 VWC2Q2TAL6 325 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 RNASEKQ6P5S7 137 aaKnown RBP13.47□□□□□ -0.25
LINC00554-201ENST00000564841 ABHD12Q8N2K0 398 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 HEATR1Q9H583 2144 aaKnown RBP13.47□□□□□ -0.25
LINC00554-201ENST00000564841 PCNX1Q96RV3 2341 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 SAA2-SAA4A0A096LPE2 208 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 IGHV3-43A0A0B4J1X8 118 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 TRAV8-6A0A0B4J262 113 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 GAGE12BA1L429 117 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 HSBP1O75506 76 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 IGHV3-43DP0DP04 118 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 FKBP2P26885 142 aaKnown RBP13.47□□□□□ -0.25
LINC00554-201ENST00000564841 PRR27Q6MZM9 219 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 H2BFWTQ7Z2G1 175 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 TMEM251Q8N6I4 163 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 OR4P4Q8NGL7 312 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 SPSB4Q96A44 273 aa13.47□□□□□ -0.25
LINC00554-201ENST00000564841 C21orf140B9A014 251 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms