RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 BOD1L1Q8NFC6 3051 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 CTXND1A0A1B0GTU2 59 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 C15orf61A6NNL5 157 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 B4DEV8 164 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 SHISA9B4DS77 424 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 USP17L23D6RBM5 183 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 CYB5BO43169 146 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 FSTL3O95633 263 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 IL6RP08887 468 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 NDUFB7P17568 137 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 FGF7P21781 194 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 CD1BP29016 333 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 MAS1LP35410 378 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 ATP5IP56385 69 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 HSPE1P61604 102 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 RPL31P62899 125 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 PNRC1Q12796 327 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 TMEM249Q2WGJ8 235 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 DUX4L9Q6RFH8 374 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 LCN15Q6UWW0 184 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 SLC35E3Q7Z769 313 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 LYG1Q8N1E2 194 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 C8orf31Q8N9H6 132 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 RXFP4Q8TDU9 374 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 NIPSNAP3BQ9BS92 247 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 NPCDR1Q9BY65 106 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 ACTR3CQ9C0K3 210 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 VCX2Q9H322 139 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 TMEM14BQ9NUH8 114 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 TMEM106BQ9NUM4 274 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 VAX2Q9UIW0 290 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 WDR83OSQ9Y284 106 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 PCNX1Q96RV3 2341 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 MAP1LC3B2A6NCE7 125 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 H3BQ15 152 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 GFRA3O60609 400 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 IFNA10P01566 189 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 CRYBA1P05813 215 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 CA7P43166 264 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 DLK1P80370 383 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 RTL8BQ17RB0 113 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 ACOT6Q3I5F7 207 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 LRRC10Q5BKY1 277 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 ADAM5Q6NVV9 412 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 FAM71F2Q6NXP2 309 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 SSX9Q7RTT3 188 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 CYB561D1Q8N8Q1 229 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF383Q8NA42 475 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 WFDC12Q8WWY7 111 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 LHX4Q969G2 390 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 TVP23CQ96ET8 276 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF714Q96N38 554 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 MAP1LC3BQ9GZQ8 125 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 SIRT7Q9NRC8 400 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 FKBP11Q9NYL4 201 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 GNG13Q9P2W3 67 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 PRNDQ9UKY0 176 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 TCF19Q9Y242 345 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF257Q9Y2Q1 563 aa5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 PUS1Q9Y606 427 aaKnown RBP eCLIP5.93□□□□□ -1.46
HERPUD1-209ENST00000564678 RAI1Q7Z5J4 1906 aaPredicted RBP5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 YLPM1P49750 1951 aaKnown RBP5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 PTPRQQ9UMZ3 2332 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 CXorf65A6NEN9 183 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 E7EQL1 145 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 FNDC10F2Z333 226 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 NDUFB3O43676 98 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 IGHV3-7P01780 117 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 CT45A6P0DMU7 189 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 CT45A5P0DMU8 189 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 CT45A7P0DMV0 189 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 RAB13P51153 203 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 KLRB1Q12918 225 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 PRR30Q53SZ7 412 aaPredicted RBP5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 OR4A47Q6IF82 309 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF833PQ6ZTB9 187 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 TGIF2LYQ8IUE0 185 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 LINC00311Q8N616 119 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 LINC00469Q8N7U9 141 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 ST6GALNAC3Q8NDV1 305 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 OR10G9Q8NGN4 311 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 OR10G7Q8NGN6 311 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF596Q8TC21 504 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 ZCCHC14Q8WYQ9 949 aaKnown RBP5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 CCL17Q92583 94 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 RAB1CQ92928 201 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 LEAP2Q969E1 77 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 HIST1H2BAQ96A08 127 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 NPVFQ9HCQ7 196 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 TMEM242Q9NWH2 141 aa5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 ANKRD11Q6UB99 2663 aaPredicted RBP5.92□□□□□ -1.46
HERPUD1-209ENST00000564678 A0A1W2PPE3 182 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 ZFP92A6NM28 416 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 PRSS46E5RG02 174 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 TMEM250H0YL14 139 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 MMP23AO75900 390 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 IGKV1D-33P01593 117 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 IGKV1-33P01594 117 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 CHRNB4P30926 498 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 ELLP55199 621 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms