RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 CHP2O43745 196 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 CREBL2O60519 120 aaPredicted RBP0.78□□□□□ -2.28
CHD9-211ENST00000564600 CLPSP04118 112 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 OR4D2P58180 307 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 LSM6P62312 80 aaKnown RBP0.78□□□□□ -2.28
CHD9-211ENST00000564600 SNRPD2P62316 118 aaKnown RBP0.78□□□□□ -2.28
CHD9-211ENST00000564600 RANP62826 216 aaKnown RBP0.78□□□□□ -2.28
CHD9-211ENST00000564600 RPL30P62888 115 aaKnown RBP0.78□□□□□ -2.28
CHD9-211ENST00000564600 RPL18Q07020 188 aaKnown RBP0.78□□□□□ -2.28
CHD9-211ENST00000564600 EDDM3AQ14507 147 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 TMEM31Q5JXX7 168 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 DEFB128Q7Z7B8 93 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 DEFB119Q8N690 84 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 CLDN22Q8N7P3 220 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 ANKRD7Q92527 254 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 FGF13Q92913 245 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 DOHHQ9BU89 302 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 TTTY13Q9BZ97 58 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 TLNRD1Q9H1K6 362 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 MIXL1Q9H2W2 232 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 EFCAB1Q9HAE3 211 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 C8orf4Q9NR00 106 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 PRTFDC1Q9NRG1 225 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 FLT4P35916 1363 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 MTUS2Q5JR59 1369 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 FLG2Q5D862 2391 aaPredicted RBP0.78□□□□□ -2.28
CHD9-211ENST00000564600 ADGRL3Q9HAR2 1447 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 PXDNLA1KZ92 1463 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 TOPBP1Q92547 1522 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 COL4A5P29400 1685 aa0.78□□□□□ -2.29
CHD9-211ENST00000564600 TRAPPC13A5PLN9 417 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 ZNF860A6NHJ4 632 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 TXNDC9O14530 226 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 KLRC4O43908 158 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 FADS1O60427 444 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 CIAO1O76071 339 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 IGHV3-7P01780 117 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 TCRBP04435 133 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 PRM2P04554 102 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 BPGMP07738 259 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 ZNF705DP0CH99 300 aaPredicted RBP0.77□□□□□ -2.29
CHD9-211ENST00000564600 ZNF705BP0CI00 300 aaPredicted RBP0.77□□□□□ -2.29
CHD9-211ENST00000564600 CDKN2CP42773 168 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 RPL28P46779 137 aaKnown RBP0.77□□□□□ -2.29
CHD9-211ENST00000564600 CSN1S1P47710 185 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 TCL1AP56279 114 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 SPCS3P61009 180 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 ERHP84090 104 aaKnown RBP0.77□□□□□ -2.29
CHD9-211ENST00000564600 STX5Q13190 355 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 TMEM97Q5BJF2 176 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 C9orf64Q5T6V5 341 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 LPCAT3Q6P1A2 487 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 RPL22L1Q6P5R6 122 aaKnown RBP0.77□□□□□ -2.29
CHD9-211ENST00000564600 C9orf163Q8N9P6 203 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 RASSF5Q8WWW0 418 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 IMMP2LQ96T52 175 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 OR8D2Q9GZM6 311 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 WDR61Q9GZS3 305 aaKnown RBP0.77□□□□□ -2.29
CHD9-211ENST00000564600 IL36BQ9NZH7 164 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 FUT9Q9Y231 359 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 TIMM9Q9Y5J7 89 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 LHFPL6Q9Y693 200 aa0.77□□□□□ -2.29
CHD9-211ENST00000564600 WRNQ14191 1432 aaPredicted RBP eCLIP0.77□□□□□ -2.29
CHD9-211ENST00000564600 PIK3C2GO75747 1445 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 TRBV20OR9-2A0A075B6H5 130 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 A0A0D9SEW6 157 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 MEIS3P1A6NDR6 274 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 TMEM210A6NLX4 147 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 FABP5P3A8MUU1 101 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 PSMD12O00232 456 aaPredicted RBP0.76□□□□□ -2.29
CHD9-211ENST00000564600 MRPS14O60783 128 aaKnown RBP0.76□□□□□ -2.29
CHD9-211ENST00000564600 RPP14O95059 124 aaKnown RBP0.76□□□□□ -2.29
CHD9-211ENST00000564600 IGKV1-5P01602 117 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 HLA-DRB1P01911 266 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 METTL15P1P0C7V9 234 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 SULT1A3P0DMM9 295 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 SULT1A4P0DMN0 295 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 SMIM10L2AP0DMW4 78 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 SMIM10L2BP0DMW5 78 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 COX6A1P12074 109 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 RAB13P51153 203 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 MYL6P60660 151 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 SRSF6Q13247 344 aaKnown RBP0.76□□□□□ -2.29
CHD9-211ENST00000564600 GRK1Q15835 563 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 NDUFA5Q16718 116 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 DHFR2Q86XF0 187 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 C10orf126Q8N4M7 172 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 TBC1D19Q8N5T2 526 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 OR8B12Q8NGG6 310 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 PFN4Q8NHR9 129 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 ZNF563Q8TA94 476 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 MBD3L1Q8WWY6 194 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 C11orf40Q8WZ69 217 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 BORCS7Q96B45 105 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 TOMM6Q96B49 74 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 ERMAPQ96PL5 475 aaPredicted RBP0.76□□□□□ -2.29
CHD9-211ENST00000564600 DERL1Q9BUN8 251 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 CXorf21Q9HAI6 301 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.76□□□□□ -2.29
CHD9-211ENST00000564600 CISHQ9NSE2 258 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms