RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ARPC4P59998 168 aa13.77□□□□□ -0.21
NME3-204ENST00000563498 CD300LFQ8TDQ1 290 aa13.77□□□□□ -0.21
NME3-204ENST00000563498 PLEKHA2Q9HB19 425 aa13.77□□□□□ -0.21
NME3-204ENST00000563498 TMEM140Q9NV12 185 aa13.77□□□□□ -0.21
NME3-204ENST00000563498 PPYP01298 95 aa13.76□□□□□ -0.21
NME3-204ENST00000563498 SERPINE2P07093 398 aa13.76□□□□□ -0.21
NME3-204ENST00000563498 ZNF773Q6PK81 442 aa13.76□□□□□ -0.21
NME3-204ENST00000563498 BEST4Q8NFU0 473 aa13.76□□□□□ -0.21
NME3-204ENST00000563498 OR10W1Q8NGF6 305 aa13.76□□□□□ -0.21
NME3-204ENST00000563498 GATAD1Q8WUU5 269 aa13.76□□□□□ -0.21
NME3-204ENST00000563498 NRG4Q8WWG1 115 aa13.76□□□□□ -0.21
NME3-204ENST00000563498 BLOC1S6Q9UL45 172 aa13.76□□□□□ -0.21
NME3-204ENST00000563498 PCLOQ9Y6V0 5065 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 SMIM30A4D0T7 59 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 C15orf62A8K5M9 175 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 CTSDP07339 412 aaPredicted RBP13.75□□□□□ -0.21
NME3-204ENST00000563498 TRAPPC2P0DI81 140 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 TRAPPC2BP0DI82 140 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 OR13C7P0DN81 318 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 FGF9P31371 208 aaPredicted RBP13.75□□□□□ -0.21
NME3-204ENST00000563498 FCGR2BP31994 310 aaPredicted RBP13.75□□□□□ -0.21
NME3-204ENST00000563498 CMC4P56277 68 aaPredicted RBP13.75□□□□□ -0.21
NME3-204ENST00000563498 WT1-ASQ06250 92 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 TPRA1Q86W33 373 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 DMBX1Q8NFW5 382 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 CHRDL1Q9BU40 450 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 C20orf24Q9BUV8 137 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 SLC5A7Q9GZV3 580 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 MFFQ9GZY8 342 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 CSTL1Q9H114 145 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 C21orf62Q9NYP8 219 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 COMMD9Q9P000 198 aa13.75□□□□□ -0.21
NME3-204ENST00000563498 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
NME3-204ENST00000563498 SLC25A24Q6NUK1 477 aa13.74□□□□□ -0.21
NME3-204ENST00000563498 HOGA1Q86XE5 327 aa13.74□□□□□ -0.21
NME3-204ENST00000563498 OR5B3Q8NH48 314 aa13.74□□□□□ -0.21
NME3-204ENST00000563498 SCARB1Q8WTV0 552 aa13.74□□□□□ -0.21
NME3-204ENST00000563498 C11orf68Q9H3H3 251 aaKnown RBP13.74□□□□□ -0.21
NME3-204ENST00000563498 RHBDL2Q9NX52 303 aa13.74□□□□□ -0.21
NME3-204ENST00000563498 DAPK2Q9UIK4 370 aa13.74□□□□□ -0.21
NME3-204ENST00000563498 TEX50A0A1B0GTY4 177 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 F8W735 103 aaPredicted RBP13.73□□□□□ -0.21
NME3-204ENST00000563498 PTHLHP12272 177 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 ADMP35318 185 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 APRG1Q8IVJ8 170 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 OR1L8Q8NGR8 309 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 LGALS14Q8TCE9 139 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 RARRES2Q99969 163 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 NDUFA4L2Q9NRX3 87 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 TXNL4BQ9NX01 149 aaKnown RBP13.73□□□□□ -0.21
NME3-204ENST00000563498 SMPXQ9UHP9 88 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 F11RQ9Y624 299 aaKnown RBP13.73□□□□□ -0.21
NME3-204ENST00000563498 HECTD4Q9Y4D8 3996 aa13.73□□□□□ -0.21
NME3-204ENST00000563498 MFAP2P55001 183 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 SCAND1P57086 179 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 TCTAP57738 103 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 SFXN4Q6P4A7 337 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 ZNF818PQ6ZRF7 136 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 CADM3Q8N126 398 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 GVQW1Q8N7I0 195 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 OR51H1Q8NH63 302 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 C11orf45Q8TAV5 145 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 GIMAP1Q8WWP7 306 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 BORCS5Q969J3 196 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 LSM10Q969L4 123 aaKnown RBP13.72□□□□□ -0.21
NME3-204ENST00000563498 ETV7Q9Y603 341 aa13.72□□□□□ -0.21
NME3-204ENST00000563498 A0A0A6YYH2 397 aa13.71□□□□□ -0.21
NME3-204ENST00000563498 A6NJ64 397 aa13.71□□□□□ -0.21
NME3-204ENST00000563498 K7EIM0 57 aa13.71□□□□□ -0.21
NME3-204ENST00000563498 IFNA4P05014 189 aa13.71□□□□□ -0.21
NME3-204ENST00000563498 FXYD4P59646 89 aa13.71□□□□□ -0.21
NME3-204ENST00000563498 ERVK-16P61578 105 aa13.71□□□□□ -0.21
NME3-204ENST00000563498 RBMS2Q15434 407 aaKnown RBP13.71□□□□□ -0.21
NME3-204ENST00000563498 AADACL3Q5VUY0 350 aa13.71□□□□□ -0.21
NME3-204ENST00000563498 RNF2Q99496 336 aa13.71□□□□□ -0.21
NME3-204ENST00000563498 RRP15Q9Y3B9 282 aaKnown RBP13.71□□□□□ -0.21
NME3-204ENST00000563498 TRAV18A0A075B6X5 111 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 IGHV3OR16-8A0A075B7F1 116 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 IGHV7-4-1A0A0J9YVY3 117 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 MARCH11A6NNE9 402 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 CHEK1O14757 476 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 ZNF207O43670 478 aaKnown RBP13.7□□□□□ -0.22
NME3-204ENST00000563498 CTSGP08311 255 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 NANOS2P60321 138 aaKnown RBP13.7□□□□□ -0.22
NME3-204ENST00000563498 RELQ04864 619 aaPredicted RBP13.7□□□□□ -0.22
NME3-204ENST00000563498 Q56UQ5 140 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 UBAC2Q8NBM4 344 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 OR10C1Q96KK4 312 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 RHPN1-AS1Q9BWJ2 59 aa13.7□□□□□ -0.22
NME3-204ENST00000563498 IGHV3-21A0A0B4J1V1 117 aa13.69□□□□□ -0.22
NME3-204ENST00000563498 MRPS14O60783 128 aaKnown RBP13.69□□□□□ -0.22
NME3-204ENST00000563498 UBE2UQ5VVX9 321 aa13.69□□□□□ -0.22
NME3-204ENST00000563498 TMEM17Q86X19 198 aa13.69□□□□□ -0.22
NME3-204ENST00000563498 TMEM116Q8NCL8 245 aa13.69□□□□□ -0.22
NME3-204ENST00000563498 OR5AP2Q8NGF4 316 aa13.69□□□□□ -0.22
NME3-204ENST00000563498 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
NME3-204ENST00000563498 C2CD4CQ8TF44 421 aa13.69□□□□□ -0.22
NME3-204ENST00000563498 ZNF414Q96IQ9 312 aa13.69□□□□□ -0.22
NME3-204ENST00000563498 FBXL17Q9UF56 701 aa13.69□□□□□ -0.22
NME3-204ENST00000563498 VPS13DQ5THJ4 4388 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms