RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 A6NDX4 124 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 GPR137BO60478 399 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 LY6G6DO95868 133 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 HOXA1P49639 335 aaPredicted RBP8.08□□□□□ -1.12
SMG1-208ENST00000563448 TAS2R30P59541 319 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 GNB1P62873 340 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 ZNF345Q14585 488 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 CLEC9AQ6UXN8 241 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 TMUB2Q71RG4 321 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 KCNRGQ8N5I3 272 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 TEX29Q8N6K0 151 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 TMEM252Q8N6L7 170 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 OR10W1Q8NGF6 305 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 OR8H1Q8NGG4 311 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 OR1L8Q8NGR8 309 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 BSCL2Q96G97 398 aaPredicted RBP8.08□□□□□ -1.12
SMG1-208ENST00000563448 A0A0D9SG52 128 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 TSC22D2O75157 780 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 NUP62P37198 522 aaPredicted RBP8.07□□□□□ -1.12
SMG1-208ENST00000563448 IER3P46695 156 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 RPL27AP46776 148 aaKnown RBP8.07□□□□□ -1.12
SMG1-208ENST00000563448 COMPP49747 757 aaPredicted RBP8.07□□□□□ -1.12
SMG1-208ENST00000563448 CAV2P51636 162 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 NHLH2Q02577 135 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 OR2F1Q13607 317 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 TUSC1Q2TAM9 212 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 Q6YL49 198 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 CIB3Q96Q77 187 aaPredicted RBP8.07□□□□□ -1.12
SMG1-208ENST00000563448 OR4C12Q96R67 309 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 PRDM13Q9H4Q3 707 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 PLEKHA3Q9HB20 300 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 HEYLQ9NQ87 328 aaPredicted RBP8.07□□□□□ -1.12
SMG1-208ENST00000563448 TLN2Q9Y4G6 2542 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 IGHV4-59P01825 116 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 S100A11P31949 105 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 IFITM2Q01629 132 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 EWSR1Q01844 656 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMG1-208ENST00000563448 TMEM267Q0VDI3 215 aaPredicted RBP8.07□□□□□ -1.12
SMG1-208ENST00000563448 SPANXN5Q5MJ07 72 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 TMEM14EPQ6UXP3 125 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 C5orf56Q8N8D9 126 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 RASL11BQ9BPW5 248 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 ARL6Q9H0F7 186 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 HIPK2Q9H2X6 1198 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 SLA2Q9H6Q3 261 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 TMEM160Q9NX00 188 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 MOB4Q9Y3A3 225 aa8.07□□□□□ -1.12
SMG1-208ENST00000563448 TEX22C9J3V5 150 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 INS-IGF2F8WCM5 200 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 ACTL6BO94805 426 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 AMY1AP04745 511 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 CD99P14209 185 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 SRP14P37108 136 aaKnown RBP8.06□□□□□ -1.12
SMG1-208ENST00000563448 WT1-ASQ06250 92 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 OPCMLQ14982 345 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 SRSF12Q8WXF0 261 aaKnown RBP8.06□□□□□ -1.12
SMG1-208ENST00000563448 SLC25A31Q9H0C2 315 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 ENY2Q9NPA8 101 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 OTOGQ6ZRI0 2925 aa8.06□□□□□ -1.12
SMG1-208ENST00000563448 IGHV7-81A0A0B4J1V7 117 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 A0A1W2PN81 502 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 SH2D7A6NKC9 451 aaPredicted RBP8.05□□□□□ -1.12
SMG1-208ENST00000563448 C15orf62A8K5M9 175 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 PMS2P5A8MQ11 134 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 FGF16O43320 207 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 LY86O95711 162 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 HLA-DRB1P01911 266 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 METTL15P1P0C7V9 234 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 CHRNA7P36544 502 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 CX3CL1P78423 397 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 NDPQ00604 133 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 FXYD3Q14802 87 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 ZNF562Q6V9R5 426 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 HAPLN4Q86UW8 402 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 TMEM170AQ8WVE7 144 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 HSPB9Q9BQS6 159 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 ZC4H2Q9NQZ6 224 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 PITPNC1Q9UKF7 332 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 STRAPQ9Y3F4 350 aaKnown RBP8.05□□□□□ -1.12
SMG1-208ENST00000563448 NOTCH2Q04721 2471 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 IGLC7A0M8Q6 106 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 CST7O76096 145 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 CNIH1O95406 144 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 IFNA10P01566 189 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 APELAP0DMC3 54 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 FOSL1P15407 271 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 SULT1A1P50225 295 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 ARL16Q0P5N6 197 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 BSXQ3C1V8 233 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 SIGLECL1Q8N7X8 197 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 ARPC5LQ9BPX5 153 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 FAM103A1Q9BTL3 118 aaKnown RBP8.05□□□□□ -1.12
SMG1-208ENST00000563448 SMIM3Q9BZL3 60 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 FBXL17Q9UF56 701 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 FBXO7Q9Y3I1 522 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 U3KQ87 197 aa8.05□□□□□ -1.12
SMG1-208ENST00000563448 MAST4O15021 2626 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 ANK3Q12955 4377 aaKnown RBP8.04□□□□□ -1.12
SMG1-208ENST00000563448 HOXA3O43365 443 aaPredicted RBP8.04□□□□□ -1.12
SMG1-208ENST00000563448 BCL2L11O43521 198 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms